Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- peroxisome 1
- plastid 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G20670.1 | EES01073 | AT2G42580.1 | 19000166 |
| AT2G20670.1 | EES02247 | AT2G42580.1 | 19000166 |
| AT2G20670.1 | OQU78515 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0519300-01 | Rice | cytosol | 73.09 | 71.9 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 65.78 | 70.46 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 66.45 | 69.93 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 67.11 | 69.66 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 66.78 | 69.07 |
| EES01469 | Sorghum | nucleus | 59.14 | 63.12 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 48.51 | 50.87 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 45.51 | 49.28 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 43.85 | 48.18 |
| VIT_12s0028g03560.t01 | Wine grape | cytosol | 41.53 | 41.25 |
| VIT_00s0265g00090.t01 | Wine grape | mitochondrion | 42.19 | 41.1 |
| KRH25597 | Soybean | nucleus | 37.54 | 39.37 |
| CDY29898 | Canola | nucleus | 36.54 | 37.29 |
| Bra024209.1-P | Field mustard | nucleus | 36.54 | 37.29 |
| KRH10888 | Soybean | mitochondrion | 36.88 | 37.0 |
| CDY18979 | Canola | nucleus | 35.88 | 36.12 |
| PGSC0003DMT400076442 | Potato | nucleus | 36.21 | 36.09 |
| CDX92863 | Canola | nucleus | 35.22 | 35.93 |
| Bra036492.1-P | Field mustard | nucleus | 35.22 | 35.69 |
| Bra026262.1-P | Field mustard | nucleus | 35.22 | 35.45 |
| CDY49659 | Canola | nucleus | 35.22 | 35.45 |
| CDY05782 | Canola | nucleus | 34.88 | 35.35 |
| PGSC0003DMT400047228 | Potato | nucleus | 33.22 | 35.21 |
| AT4G32480.1 | Thale cress | nucleus | 33.55 | 35.19 |
| CDY31947 | Canola | nucleus | 34.55 | 35.02 |
| PGSC0003DMT400033381 | Potato | cytosol, mitochondrion, nucleus | 35.55 | 34.97 |
| CDX81975 | Canola | nucleus | 34.22 | 34.8 |
| Solyc02g078150.2.1 | Tomato | nucleus | 35.55 | 34.74 |
| CDY13861 | Canola | nucleus | 33.89 | 34.46 |
| KRH21430 | Soybean | mitochondrion, nucleus | 34.55 | 34.44 |
| Solyc03g006410.2.1 | Tomato | cytosol | 34.55 | 34.21 |
| KRH20449 | Soybean | mitochondrion | 37.21 | 34.04 |
| Bra031136.1-P | Field mustard | nucleus | 33.22 | 34.01 |
| AT2G20670.1 | Thale cress | nucleus | 33.22 | 34.01 |
| KRH50053 | Soybean | mitochondrion | 36.21 | 33.85 |
| Solyc02g078160.2.1 | Tomato | nucleus | 31.89 | 31.79 |
| Solyc07g053900.2.1 | Tomato | cytosol | 33.22 | 31.25 |
| EER95459 | Sorghum | plastid | 25.91 | 26.09 |
| EES04096 | Sorghum | cytosol | 24.92 | 25.34 |
| EER91615 | Sorghum | mitochondrion | 24.58 | 25.26 |
| EES07354 | Sorghum | cytosol | 24.92 | 24.27 |
| OQU87982 | Sorghum | cytosol | 22.26 | 23.84 |
| EER93295 | Sorghum | plastid | 28.57 | 21.88 |
| EER98072 | Sorghum | cytosol, plastid | 28.24 | 17.93 |
Protein Annotations
| EnsemblPlants:EES19824 | EnsemblPlantsGene:SORBI_3009G200900 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF7 | PFAM:PF04720 |
| ProteinID:EES19824 | ProteinID:EES19824.1 | RefSeq:XP_002441394.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0001A89083 |
| UniProt:C5Z1A8 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:55065457..55067401
Molecular Weight (calculated)
31961.7 Da
IEP (calculated)
8.279
GRAVY (calculated)
-0.360
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVGEAAAAA GNEMSLSNMV LGFYEEAEKE RWPPEDATAA ATTAGDGGSD DDDDEGSSPS GGRAQSAAFW REQRSPLAKT SSAESRIQAD TEEAVRQMRA
101: TPGGVCSCAT RAAAAAGGCR GCALRFLADR LRDAGYNSAV CRSKWSRTPE IPSGEHSYVD VVVPTRRSGK AVRVVIEPSF RAEFEMARGG AEYRALVAAL
201: PDLFVGRSEK LRAVVRVMCD AARQCARESG MHMAPWRKHR YMEAKWLGTP ERVVAPGGTG TGAGGAAVAI RVGSPEKQTR SRVRASMLTL DFGGRTAVEV
301: V
101: TPGGVCSCAT RAAAAAGGCR GCALRFLADR LRDAGYNSAV CRSKWSRTPE IPSGEHSYVD VVVPTRRSGK AVRVVIEPSF RAEFEMARGG AEYRALVAAL
201: PDLFVGRSEK LRAVVRVMCD AARQCARESG MHMAPWRKHR YMEAKWLGTP ERVVAPGGTG TGAGGAAVAI RVGSPEKQTR SRVRASMLTL DFGGRTAVEV
301: V
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.