Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076442 | Potato | nucleus | 95.45 | 97.35 |
| Solyc02g078160.2.1 | Tomato | nucleus | 71.1 | 72.52 |
| Solyc03g006410.2.1 | Tomato | cytosol | 63.64 | 64.47 |
| KRH10888 | Soybean | mitochondrion | 50.65 | 52.0 |
| VIT_00s0265g00090.t01 | Wine grape | mitochondrion | 51.95 | 51.78 |
| KRH21430 | Soybean | mitochondrion, nucleus | 49.35 | 50.33 |
| KRH20449 | Soybean | mitochondrion | 50.32 | 47.11 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 40.91 | 45.99 |
| KRH50053 | Soybean | mitochondrion | 48.05 | 45.96 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 41.88 | 44.95 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 39.94 | 44.24 |
| Solyc07g053900.2.1 | Tomato | cytosol | 44.48 | 42.81 |
| HORVU3Hr1G071220.1 | Barley | nucleus | 36.36 | 42.75 |
| EES01469 | Sorghum | nucleus | 37.99 | 41.49 |
| TraesCS3B01G307800.1 | Wheat | nucleus | 37.01 | 40.86 |
| Zm00001d043444_P001 | Maize | nucleus | 37.66 | 40.85 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 35.71 | 39.71 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 35.71 | 39.43 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 34.09 | 37.37 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 34.42 | 36.55 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 33.77 | 36.36 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 34.09 | 36.08 |
| Os05t0519300-01 | Rice | cytosol | 35.71 | 35.95 |
| EES19824 | Sorghum | cytosol | 34.74 | 35.55 |
| Solyc11g042630.1.1 | Tomato | cytosol | 23.38 | 25.35 |
| Solyc06g054640.1.1 | Tomato | cytosol | 18.18 | 25.23 |
| Solyc06g007580.1.1 | Tomato | nucleus | 23.05 | 23.75 |
| Solyc06g083160.1.1 | Tomato | nucleus | 22.08 | 23.21 |
| Solyc11g012120.1.1 | Tomato | cytosol | 21.43 | 22.22 |
| Solyc09g057760.2.1 | Tomato | nucleus | 13.31 | 18.98 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 23.05 | 18.25 |
| Solyc06g005480.2.1 | Tomato | cytosol | 18.18 | 17.95 |
| Solyc09g082980.2.1 | Tomato | nucleus | 23.05 | 17.84 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 23.38 | 16.55 |
Protein Annotations
| EnsemblPlants:Solyc02g078150.2.1 | EnsemblPlantsGene:Solyc02g078150.2 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF2 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI00027680CD | UniProt:K4B940 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2:+:42930528..42931940
Molecular Weight (calculated)
35295.1 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.552
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVMARKPL NHRILTWDHR EIEISGEPTI NNSDTVFSFL DEEVQSSSPE SINDDVYVNN RDDEDDDDDN ENKENVEDNQ FWENQHQLLQ SVLCRTTSLE
101: SQIRSITKET KQSENVCSCR KMVGDGCRNC LMKEVSSRLQ NAGFNSAICK SKWKSSPDIP SGEHTFIDVV DNSSLKKGEV RIIIELNFRC EFELAKASEG
201: YNRLVKCLPE VFVGKIERLL SVIKILCNGA KKCMKVKKIH VAPWRKQKYM QAKWLKTVER TAVNVKSPVT NAEYTSYDPL PRRPRPSMLT MDFLEFVPNL
301: HCTVVKVA
101: SQIRSITKET KQSENVCSCR KMVGDGCRNC LMKEVSSRLQ NAGFNSAICK SKWKSSPDIP SGEHTFIDVV DNSSLKKGEV RIIIELNFRC EFELAKASEG
201: YNRLVKCLPE VFVGKIERLL SVIKILCNGA KKCMKVKKIH VAPWRKQKYM QAKWLKTVER TAVNVKSPVT NAEYTSYDPL PRRPRPSMLT MDFLEFVPNL
301: HCTVVKVA
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.