Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37828 | Soybean | cytosol | 23.91 | 47.02 |
| KRH11519 | Soybean | mitochondrion | 49.16 | 46.79 |
| KRH51155 | Soybean | cytosol | 45.12 | 45.12 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 48.82 | 43.15 |
| CDY53353 | Canola | mitochondrion | 42.09 | 42.66 |
| CDY30048 | Canola | mitochondrion | 42.09 | 42.37 |
| Bra019736.1-P | Field mustard | mitochondrion | 41.75 | 42.32 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 41.75 | 41.2 |
| Bra016797.1-P | Field mustard | cytosol | 40.4 | 40.68 |
| CDY21027 | Canola | cytosol | 40.4 | 40.68 |
| AT1G12030.1 | Thale cress | mitochondrion | 40.07 | 40.34 |
| CDY31234 | Canola | cytosol | 39.73 | 40.14 |
| AT1G62420.1 | Thale cress | cytosol | 37.71 | 39.58 |
| Solyc06g083160.1.1 | Tomato | nucleus | 30.64 | 31.06 |
| Solyc06g007580.1.1 | Tomato | nucleus | 30.3 | 30.1 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 28.96 | 29.97 |
| Solyc06g054640.1.1 | Tomato | cytosol | 18.52 | 24.77 |
| TraesCS6A01G283100.1 | Wheat | cytosol | 25.93 | 24.76 |
| TraesCS6D01G263600.1 | Wheat | cytosol | 26.6 | 24.69 |
| EES07354 | Sorghum | cytosol | 24.92 | 23.95 |
| Os02t0720400-00 | Rice | nucleus | 25.93 | 23.26 |
| Zm00001d051691_P001 | Maize | cytosol | 24.58 | 23.25 |
| Solyc06g005480.2.1 | Tomato | cytosol | 22.9 | 21.79 |
| Solyc02g078150.2.1 | Tomato | nucleus | 22.22 | 21.43 |
| Solyc02g078160.2.1 | Tomato | nucleus | 21.55 | 21.19 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 26.6 | 20.31 |
| Solyc07g053900.2.1 | Tomato | cytosol | 21.55 | 20.0 |
| Solyc09g057760.2.1 | Tomato | nucleus | 14.48 | 19.91 |
| Solyc09g082980.2.1 | Tomato | nucleus | 26.6 | 19.85 |
| Solyc03g006410.2.1 | Tomato | cytosol | 20.2 | 19.74 |
| Solyc11g042630.1.1 | Tomato | cytosol | 18.18 | 19.01 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 23.57 | 16.09 |
Protein Annotations
| EnsemblPlants:Solyc11g012120.1.1 | EnsemblPlantsGene:Solyc11g012120.1 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0002769DEF | UniProt:K4D617 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr11:-:5041281..5042288
Molecular Weight (calculated)
33661.1 Da
IEP (calculated)
7.250
GRAVY (calculated)
-0.423
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MARIVPVKFK RVAEAFDEVV KTRICESSGS EHSPPPESLA NLSQLVNSFL EGEVITVNEK LEEIDGNVET NCFDESEIKE NLRNLLDPDG NSGDDLKKNV
101: INAVENALLA EEASSPEFKR WLMTRLRDQG FDAGLCKLKW EKAVNRTSGS YEYIDVNIGV TRYIIEVSLV EEFEIARATP CYTSLLENFP HVFVGKVEEL
201: KQVVRIMSRA MKRSMKKMNI YVAPWRRLAY MEAKWFGSYK RTTNEQKDYQ KNSFDSSSKK RNVGFVPKQA ISFYCRENVV ASNSGIKIGN LAAALNG
101: INAVENALLA EEASSPEFKR WLMTRLRDQG FDAGLCKLKW EKAVNRTSGS YEYIDVNIGV TRYIIEVSLV EEFEIARATP CYTSLLENFP HVFVGKVEEL
201: KQVVRIMSRA MKRSMKKMNI YVAPWRRLAY MEAKWFGSYK RTTNEQKDYQ KNSFDSSSKK RNVGFVPKQA ISFYCRENVV ASNSGIKIGN LAAALNG
001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
Arabidopsis Description
At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.