Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047228 | Potato | nucleus | 82.5 | 92.96 |
| KRH25597 | Soybean | nucleus | 41.88 | 46.69 |
| VIT_12s0028g03560.t01 | Wine grape | cytosol | 43.75 | 46.2 |
| CDY05782 | Canola | nucleus | 42.19 | 45.45 |
| AT4G32480.1 | Thale cress | nucleus | 40.62 | 45.3 |
| Bra036492.1-P | Field mustard | nucleus | 41.88 | 45.12 |
| CDY31947 | Canola | nucleus | 41.56 | 44.78 |
| Bra024209.1-P | Field mustard | nucleus | 41.25 | 44.75 |
| CDX92863 | Canola | nucleus | 41.25 | 44.75 |
| CDY29898 | Canola | nucleus | 41.25 | 44.75 |
| Solyc02g078150.2.1 | Tomato | nucleus | 42.81 | 44.48 |
| Solyc02g078160.2.1 | Tomato | nucleus | 41.88 | 44.37 |
| CDX81975 | Canola | nucleus | 40.94 | 44.26 |
| Bra031136.1-P | Field mustard | nucleus | 40.62 | 44.22 |
| AT2G20670.1 | Thale cress | nucleus | 40.31 | 43.88 |
| Solyc03g006410.2.1 | Tomato | cytosol | 41.56 | 43.75 |
| CDY13861 | Canola | nucleus | 40.31 | 43.58 |
| CDY49659 | Canola | nucleus | 40.62 | 43.48 |
| Bra026262.1-P | Field mustard | nucleus | 40.62 | 43.48 |
| CDY18979 | Canola | nucleus | 40.31 | 43.14 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 35.31 | 41.24 |
| EES01469 | Sorghum | nucleus | 34.38 | 39.01 |
| Zm00001d043444_P001 | Maize | nucleus | 34.38 | 38.73 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 34.69 | 38.68 |
| HORVU3Hr1G071220.1 | Barley | nucleus | 31.25 | 38.17 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 33.12 | 38.13 |
| TraesCS3B01G307800.1 | Wheat | nucleus | 31.25 | 35.84 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 30.94 | 35.74 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 30.62 | 35.13 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 30.0 | 34.16 |
| EES19824 | Sorghum | cytosol | 31.25 | 33.22 |
| Os05t0519300-01 | Rice | cytosol | 31.25 | 32.68 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 29.06 | 32.07 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 28.44 | 31.82 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 28.44 | 31.27 |
| Solyc11g042630.1.1 | Tomato | cytosol | 22.5 | 25.35 |
| Solyc06g054640.1.1 | Tomato | cytosol | 17.19 | 24.77 |
| Solyc11g012120.1.1 | Tomato | cytosol | 20.0 | 21.55 |
| Solyc06g007580.1.1 | Tomato | nucleus | 19.06 | 20.4 |
| Solyc06g083160.1.1 | Tomato | nucleus | 17.5 | 19.11 |
| Solyc06g005480.2.1 | Tomato | cytosol | 17.19 | 17.63 |
| Solyc09g057760.2.1 | Tomato | nucleus | 11.88 | 17.59 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 20.94 | 17.22 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 21.56 | 15.86 |
| Solyc09g082980.2.1 | Tomato | nucleus | 19.38 | 15.58 |
Protein Annotations
| EnsemblPlants:Solyc07g053900.2.1 | EnsemblPlantsGene:Solyc07g053900.2 | InterPro:PDDEXK-like | ncoils:Coil | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF2 |
| PFAM:PF04720 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI000276C200 | UniProt:K4CFT5 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7:-:62304722..62306075
Molecular Weight (calculated)
36952.0 Da
IEP (calculated)
8.399
GRAVY (calculated)
-0.451
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKNSDEPE GLYELTFGFT DEGIEFQSCE NSLKSNISYN SEEILMEEEE EENVNDSEEN KAFWASQEEL LKTTLCRTTS FESKVRKATK EALKELKFTS
101: FKCSCRKMVS DGCRKCMQRE ISDRLTNEGY NCFICKSKWK STPEIPSGIL LSDKMTLLSR STEIQLKKTK SALTLICLLF FILKGEYTYI EVMTNASSKK
201: GEMKVIIELN FRGEFEMARV NEGYNRLVEK LPEVYVGKIE RLRNLIKILC CASKKCMKEK KMHMAPWRKH KYMQAKYLGS PEIKSETIFP VNYLRRLPRP
301: SGSMLTFDLL DSLTPAIKVI
101: FKCSCRKMVS DGCRKCMQRE ISDRLTNEGY NCFICKSKWK STPEIPSGIL LSDKMTLLSR STEIQLKKTK SALTLICLLF FILKGEYTYI EVMTNASSKK
201: GEMKVIIELN FRGEFEMARV NEGYNRLVEK LPEVYVGKIE RLRNLIKILC CASKKCMKEK KMHMAPWRKH KYMQAKYLGS PEIKSETIFP VNYLRRLPRP
301: SGSMLTFDLL DSLTPAIKVI
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.