Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g078150.2.1 | Tomato | nucleus | 72.52 | 71.1 |
| Solyc03g006410.2.1 | Tomato | cytosol | 65.89 | 65.46 |
| KRH10888 | Soybean | mitochondrion | 50.99 | 51.33 |
| VIT_00s0265g00090.t01 | Wine grape | mitochondrion | 52.32 | 51.13 |
| KRH21430 | Soybean | mitochondrion, nucleus | 48.68 | 48.68 |
| KRH20449 | Soybean | mitochondrion | 49.34 | 45.29 |
| KRH50053 | Soybean | mitochondrion | 48.01 | 45.03 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 41.72 | 43.9 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 39.74 | 43.8 |
| Solyc07g053900.2.1 | Tomato | cytosol | 44.37 | 41.88 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 38.08 | 41.37 |
| EES01469 | Sorghum | nucleus | 36.09 | 38.65 |
| HORVU3Hr1G071220.1 | Barley | nucleus | 33.44 | 38.55 |
| Zm00001d043444_P001 | Maize | nucleus | 36.09 | 38.38 |
| TraesCS3B01G307800.1 | Wheat | nucleus | 35.43 | 38.35 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 34.11 | 36.92 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 33.77 | 36.82 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 30.46 | 32.74 |
| Os05t0519300-01 | Rice | cytosol | 32.78 | 32.35 |
| EES19824 | Sorghum | cytosol | 31.79 | 31.89 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 30.46 | 31.72 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 29.8 | 31.47 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 29.8 | 30.93 |
| Solyc11g042630.1.1 | Tomato | cytosol | 24.17 | 25.7 |
| Solyc06g054640.1.1 | Tomato | cytosol | 17.55 | 23.87 |
| Solyc06g007580.1.1 | Tomato | nucleus | 21.52 | 21.74 |
| Solyc11g012120.1.1 | Tomato | cytosol | 21.19 | 21.55 |
| Solyc06g083160.1.1 | Tomato | nucleus | 20.86 | 21.5 |
| Solyc09g057760.2.1 | Tomato | nucleus | 15.23 | 21.3 |
| Solyc06g005480.2.1 | Tomato | cytosol | 20.2 | 19.55 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 25.17 | 19.54 |
| Solyc09g082980.2.1 | Tomato | nucleus | 25.17 | 19.1 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 23.84 | 16.55 |
Protein Annotations
| EnsemblPlants:Solyc02g078160.2.1 | EnsemblPlantsGene:Solyc02g078160.2 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF2 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI00027680CE | UniProt:K4B941 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2:+:42934532..42936396
Molecular Weight (calculated)
34269.1 Da
IEP (calculated)
7.759
GRAVY (calculated)
-0.404
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVMARRPL SHRILTCHNR ESEFSGDHAI NISDTIFSFL DEEGSSTESV TDDVYVEDEN EEKENVEYNQ FWETQRQLLQ SVLCRTTTLE SQIRSITKQT
101: LKEASKNCSC KMVNNISITT SCPNCLMKEV CTSLQNAGFN SAICKSKWKS SPDIPSGEHT FIDVIDNSST MKGEVRIIIE LNFRGEFELA KASEEYNRLV
201: KCLPEVFVGK IERLLSVIKI LCNGAKKCMK DKKMHIAPWR KQKYVQAKWL KTCERMSTTS KSPLSAEEHC YSNRLSRPKA SMLTVDLLGN IPSLCRNAVE
301: VV
101: LKEASKNCSC KMVNNISITT SCPNCLMKEV CTSLQNAGFN SAICKSKWKS SPDIPSGEHT FIDVIDNSST MKGEVRIIIE LNFRGEFELA KASEEYNRLV
201: KCLPEVFVGK IERLLSVIKI LCNGAKKCMK DKKMHIAPWR KQKYVQAKWL KTCERMSTTS KSPLSAEEHC YSNRLSRPKA SMLTVDLLGN IPSLCRNAVE
301: VV
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.