Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045914 | Potato | cytosol, extracellular, nucleus | 89.44 | 90.71 |
| VIT_18s0001g06070.t01 | Wine grape | nucleus | 41.2 | 43.66 |
| KRH27801 | Soybean | cytosol | 36.62 | 37.82 |
| KRH77753 | Soybean | cytosol | 35.92 | 37.5 |
| Solyc02g078160.2.1 | Tomato | nucleus | 25.7 | 24.17 |
| Solyc03g006410.2.1 | Tomato | cytosol | 25.7 | 24.01 |
| Solyc02g078150.2.1 | Tomato | nucleus | 25.35 | 23.38 |
| Solyc06g054640.1.1 | Tomato | cytosol | 17.96 | 22.97 |
| Solyc07g053900.2.1 | Tomato | cytosol | 25.35 | 22.5 |
| Solyc06g007580.1.1 | Tomato | nucleus | 19.37 | 18.39 |
| Solyc11g012120.1.1 | Tomato | cytosol | 19.01 | 18.18 |
| Solyc06g005480.2.1 | Tomato | cytosol | 19.72 | 17.95 |
| Solyc06g083160.1.1 | Tomato | nucleus | 18.31 | 17.75 |
| Solyc09g082980.2.1 | Tomato | nucleus | 21.83 | 15.58 |
| Solyc09g057760.2.1 | Tomato | nucleus | 11.62 | 15.28 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 20.77 | 15.17 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 20.42 | 13.33 |
Protein Annotations
| EnsemblPlants:Solyc11g042630.1.1 | EnsemblPlantsGene:Solyc11g042630.1 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF17 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI000276A11D | UniProt:K4D833 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr11:+:35629279..35633974
Molecular Weight (calculated)
32285.9 Da
IEP (calculated)
8.310
GRAVY (calculated)
-0.408
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEENKIISS LYHNIFILTN DDEEGGGAGG GGYNDENLST YIFGCEDDNN NDTQVTMENA IYWESQEALL KEILEQYRLI GSKVREGITR SVEGTKDVGI
101: NNVICECLYG KVDRPISCAK CFRRRVVEEL CEKGFNASLC TSKWNHTSKM PGGRHEYIQV IASTEGKKKK VPLLIELEFQ DEFKLAKSCK EYSKLITLLP
201: QVFIGKSEHL NAIVRLMCDA AKRSTVQQRI NLAPWRKRNF MQMKWSAYNS EKRLLHHNQI ILTKLTQQLL FRPPLTAAAA LKVA
101: NNVICECLYG KVDRPISCAK CFRRRVVEEL CEKGFNASLC TSKWNHTSKM PGGRHEYIQV IASTEGKKKK VPLLIELEFQ DEFKLAKSCK EYSKLITLLP
201: QVFIGKSEHL NAIVRLMCDA AKRSTVQQRI NLAPWRKRNF MQMKWSAYNS EKRLLHHNQI ILTKLTQQLL FRPPLTAAAA LKVA
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.