Factsheet for Solyc09g065760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049773	Potato	nucleus	93.33	93.55
CDX93300	Canola	cytosol	36.78	53.33
VIT_00s0179g00360.t01	Wine grape	cytosol	48.05	52.64
Bra017099.1-P	Field mustard	cytosol	35.86	52.0
CDY18366	Canola	cytosol	35.86	52.0
KRH71351	Soybean	cytosol	42.53	51.53
KRH32089	Soybean	cytosol	40.0	51.33
KRG95606	Soybean	cytosol	42.07	50.69
AT2G38820.2	Thale cress	cytosol	35.63	50.0
GSMUA_Achr3P15230_001	Banana	cytosol	38.39	49.55
CDY14428	Canola	cytosol	34.94	48.87
Bra000098.1-P	Field mustard	cytosol	34.71	48.87
CDY07696	Canola	cytosol	34.94	48.72
Solyc06g053910.2.1	Tomato	cytosol, plastid	41.38	46.27
GSMUA_Achr8P26930_001	Banana	cytosol	37.01	45.61
Solyc09g082980.2.1	Tomato	nucleus	41.61	45.48
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	37.24	45.13
GSMUA_Achr8P20590_001	Banana	plastid	37.24	44.63
GSMUA_Achr8P04470_001	Banana	cytosol	37.7	44.57
AT3G54550.1	Thale cress	plastid	29.43	44.44
GSMUA_Achr4P14880_001	Banana	mitochondrion	26.44	43.56
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	36.78	41.88
EER91615	Sorghum	mitochondrion	26.67	39.59
Os10t0417800-01	Rice	plastid	27.13	39.2
GSMUA_Achr9P25590_001	Banana	plastid	36.55	39.07
Os03t0162500-01	Rice	plastid	27.36	38.76
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	26.67	38.67
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	27.59	38.59
EER95459	Sorghum	plastid	26.44	38.46
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	27.36	38.26
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	27.59	38.1
Zm00001d027763_P001	Maize	plastid	25.98	37.67
TraesCS5B01G442200.1	Wheat	plastid	32.18	37.33
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	26.9	37.14
TraesCS5A01G439200.1	Wheat	plastid	31.95	37.07
TraesCS5D01G446400.1	Wheat	plastid	32.18	36.75
Solyc06g054640.1.1	Tomato	cytosol	18.62	36.49
EER93295	Sorghum	plastid	32.41	35.88
Os03t0796600-01	Rice	cytosol, nucleus, plastid	32.87	35.31
Zm00001d034444_P002	Maize	plastid	32.18	34.57
Zm00001d018962_P001	Maize	mitochondrion, plastid	29.89	33.94
HORVU5Hr1G105950.2	Barley	plastid	31.49	33.66
Zm00001d007820_P002	Maize	plastid	30.11	32.67
EER98072	Sorghum	cytosol, plastid	30.34	27.85
Solyc06g083160.1.1	Tomato	nucleus	16.78	24.91
Solyc06g007580.1.1	Tomato	nucleus	16.55	24.08
Solyc02g078160.2.1	Tomato	nucleus	16.55	23.84
Solyc03g006410.2.1	Tomato	cytosol	16.55	23.68
Solyc11g012120.1.1	Tomato	cytosol	16.09	23.57
Solyc02g078150.2.1	Tomato	nucleus	16.55	23.38
Solyc06g005480.2.1	Tomato	cytosol	16.55	23.08
Solyc07g053900.2.1	Tomato	cytosol	15.86	21.56
Solyc11g042630.1.1	Tomato	cytosol	13.33	20.42
Solyc09g057760.2.1	Tomato	nucleus	10.11	20.37

Protein Annotations

EnsemblPlants:Solyc09g065760.2.1	EnsemblPlantsGene:Solyc09g065760.2	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF5	PFAM:PF04720
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000276C932	UniProt:K4CUK2	MapMan:35.2	:

Description

No Description!

Coordinates

chr9:+:64042130..64044919

Molecular Weight (calculated)

48411.8 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.452

Length

435 amino acids

Sequence
(BLAST)

001: MPFPMKIQPV DFSTVEESSR CDSFKPVPKS RFKRLFERQF SGLLRSSAPE KLVTGEDLIG NKKDASEELE PSSVCLAKMV QTFIEEGEDK HRCNRSRCSC
101: FNCNGTESSE EENDSVNCFG ESNQNCSSDA CEILKSVVSC PSVLERNVLA EITKIIEKNR MVKRKDNFIR KMVVDGLLAM EYDASICESR WEKTPSTPAG
201: AYEYIDVVTE GERLIIDIDF RSEFEIARST RSYKCLLQVL PNIFVGKADR LQKIVHLLTE AAKLSLKKKG MPCPPWRKVE YVKAKWLSTY TRMTPVLMPI
301: ASNSTSEPGT ACKTTKEAIK EETSEVFRGE MNLVFGGKSS PLADNNPKSA GTSPLFACDD EKNLAVKLGD IFEGKSSPLA ENNTKRASTS SLFACDIEKN
401: AMAAQLGEPL EIKPKDSSNC ARKMTGLTSL IEDHT

Best Arabidopsis Sequence Match ( AT3G22970.1 )
(BLAST)

001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP

Arabidopsis Description

At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.