Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025041 | Potato | cytosol | 95.19 | 95.19 |
| VIT_13s0019g01100.t01 | Wine grape | nucleus | 46.15 | 52.94 |
| KRH70457 | Soybean | cytosol | 49.68 | 50.32 |
| KRH01670 | Soybean | nucleus | 49.36 | 50.0 |
| AT2G39650.1 | Thale cress | cytosol | 42.95 | 46.05 |
| CDY07644 | Canola | cytosol | 42.63 | 44.19 |
| Bra000140.1-P | Field mustard | cytosol | 42.63 | 44.04 |
| CDY24955 | Canola | cytosol | 42.31 | 43.71 |
| Os01t0973600-01 | Rice | plastid | 46.47 | 43.03 |
| GSMUA_Achr10P... | Banana | mitochondrion | 47.76 | 42.82 |
| Zm00001d041955_P001 | Maize | plastid | 44.87 | 40.7 |
| TraesCS3A01G530700.1 | Wheat | plastid | 43.91 | 39.71 |
| TraesCS3D01G536200.1 | Wheat | plastid | 43.59 | 39.31 |
| TraesCS3B01G600900.1 | Wheat | plastid | 43.91 | 39.26 |
| HORVU3Hr1G115940.1 | Barley | plastid | 44.55 | 32.86 |
| GSMUA_Achr5P07100_001 | Banana | cytosol | 47.44 | 28.63 |
| Solyc06g054640.1.1 | Tomato | cytosol | 17.95 | 25.23 |
| Solyc11g012120.1.1 | Tomato | cytosol | 21.79 | 22.9 |
| Solyc06g083160.1.1 | Tomato | nucleus | 20.19 | 21.5 |
| Solyc06g007580.1.1 | Tomato | nucleus | 19.87 | 20.74 |
| Solyc02g078160.2.1 | Tomato | nucleus | 19.55 | 20.2 |
| Solyc09g057760.2.1 | Tomato | nucleus | 13.78 | 19.91 |
| Solyc09g082980.2.1 | Tomato | nucleus | 25.32 | 19.85 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 24.68 | 19.79 |
| Solyc11g042630.1.1 | Tomato | cytosol | 17.95 | 19.72 |
| Solyc03g006410.2.1 | Tomato | cytosol | 18.91 | 19.41 |
| Solyc02g078150.2.1 | Tomato | nucleus | 17.95 | 18.18 |
| Solyc07g053900.2.1 | Tomato | cytosol | 17.63 | 17.19 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 23.08 | 16.55 |
Protein Annotations
| EnsemblPlants:Solyc06g005480.2.1 | EnsemblPlantsGene:Solyc06g005480.2 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF19 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0002765B3A | UniProt:K4C330 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:-:488230..492767
Molecular Weight (calculated)
34134.5 Da
IEP (calculated)
7.631
GRAVY (calculated)
-0.264
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSNERRFPV VVNGGGGGGN WLNRGDGVGS GGCYSHESEP DLAAMVSDFL ESSSAGAESR CSSDNDSGYS DLALLADTIS LYKNSVDRYE SDLTMVVHSL
101: ILSMTESFHN GKPETCNASC IRSYLVKLLQ SCGFNADMCA IKWQGCGKIP GGEHEYIEVI SHGNDGCSER YIIDLDFRSH FEIARAVKSY NVVLSCLPPV
201: YVGTVTKLKL YLQAMVEAAK CSLKQNSMPL PPWRSLAYLE AKWESSHKVA NVQVQSSVSS SNSSHRHCTE LLWRIKSCIG SEIKAKGFVV LKNCRKRQGL
301: KIESSHSSPV TP
101: ILSMTESFHN GKPETCNASC IRSYLVKLLQ SCGFNADMCA IKWQGCGKIP GGEHEYIEVI SHGNDGCSER YIIDLDFRSH FEIARAVKSY NVVLSCLPPV
201: YVGTVTKLKL YLQAMVEAAK CSLKQNSMPL PPWRSLAYLE AKWESSHKVA NVQVQSSVSS SNSSHRHCTE LLWRIKSCIG SEIKAKGFVV LKNCRKRQGL
301: KIESSHSSPV TP
001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
Arabidopsis Description
At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.