Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07644 | Canola | cytosol | 97.02 | 97.34 |
| AT2G39650.1 | Thale cress | cytosol | 86.42 | 89.69 |
| VIT_13s0019g01100.t01 | Wine grape | nucleus | 53.31 | 59.19 |
| KRH70457 | Soybean | cytosol | 53.97 | 52.92 |
| KRH01670 | Soybean | nucleus | 52.65 | 51.62 |
| Os01t0973600-01 | Rice | plastid | 51.99 | 46.59 |
| GSMUA_Achr10P... | Banana | mitochondrion | 52.32 | 45.4 |
| Zm00001d041955_P001 | Maize | plastid | 50.33 | 44.19 |
| TraesCS3D01G536200.1 | Wheat | plastid | 50.0 | 43.64 |
| TraesCS3B01G600900.1 | Wheat | plastid | 50.33 | 43.55 |
| TraesCS3A01G530700.1 | Wheat | plastid | 49.67 | 43.48 |
| Solyc06g005480.2.1 | Tomato | cytosol | 43.71 | 42.31 |
| PGSC0003DMT400025041 | Potato | cytosol | 42.72 | 41.35 |
| HORVU3Hr1G115940.1 | Barley | plastid | 50.0 | 35.7 |
| GSMUA_Achr5P07100_001 | Banana | cytosol | 51.32 | 29.98 |
| CDY60822 | Canola | nucleus | 26.16 | 26.42 |
| CDY34904 | Canola | nucleus | 26.16 | 26.16 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 25.83 | 26.0 |
| CDY35924 | Canola | nucleus | 25.5 | 25.67 |
| CDY18366 | Canola | cytosol | 25.17 | 25.33 |
| CDX93300 | Canola | cytosol | 24.83 | 25.0 |
| CDY52283 | Canola | nucleus | 22.52 | 24.11 |
| CDY14428 | Canola | cytosol | 24.5 | 23.79 |
| CDY07696 | Canola | cytosol | 24.17 | 23.4 |
| CDY15101 | Canola | nucleus | 21.52 | 23.38 |
| CDX92970 | Canola | cytosol | 24.83 | 22.52 |
| CDX88346 | Canola | nucleus | 18.21 | 21.4 |
| CDY53353 | Canola | mitochondrion | 20.53 | 21.16 |
| CDX94877 | Canola | cytosol | 24.17 | 21.04 |
| CDX87538 | Canola | nucleus | 17.88 | 21.01 |
| CDY10330 | Canola | cytosol | 25.17 | 20.77 |
| CDY29898 | Canola | nucleus | 20.2 | 20.68 |
| CDY30048 | Canola | mitochondrion | 20.2 | 20.68 |
| CDY49659 | Canola | nucleus | 20.2 | 20.4 |
| CDY18979 | Canola | nucleus | 20.2 | 20.4 |
| CDY21027 | Canola | cytosol | 19.87 | 20.34 |
| CDX92863 | Canola | nucleus | 19.87 | 20.34 |
| CDX88345 | Canola | nucleus | 17.88 | 20.15 |
| CDY29750 | Canola | nucleus, plastid | 23.51 | 20.06 |
| CDY13861 | Canola | nucleus | 19.54 | 19.93 |
| CDY16266 | Canola | nucleus | 23.51 | 19.89 |
| CDX87539 | Canola | nucleus | 17.55 | 19.78 |
| CDY31234 | Canola | cytosol | 19.21 | 19.73 |
| CDX81975 | Canola | nucleus | 19.21 | 19.59 |
| CDY10329 | Canola | plastid | 24.5 | 19.58 |
| CDX88344 | Canola | cytosol | 16.89 | 19.25 |
| CDY05782 | Canola | nucleus | 18.87 | 19.19 |
| CDY31947 | Canola | nucleus | 18.87 | 19.19 |
| CDX87540 | Canola | cytosol | 16.23 | 18.63 |
Protein Annotations
| EnsemblPlants:CDY24955 | EnsemblPlantsGene:GSBRNA2T00028752001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF19 | PFAM:PF04720 |
| ProteinID:CDY24955 | ProteinID:CDY24955.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EC7A89 | UniProt:A0A078GEL0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g22170DBnaC03g22170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEL0]
Coordinates
chrLK032166:+:485233..487635
Molecular Weight (calculated)
33652.2 Da
IEP (calculated)
7.499
GRAVY (calculated)
-0.402
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMDLRVVPA EEWWERGRDS SLDGECDLGL MVTDFLETGG GGSGGGGGGG DSWCSSDSDS GFPDPSYLSD KIQFLKYSMP QHETEVLSAV RTLMLSIKEK
101: DLHSVKSGTC NASCIRFYLA KLLRLSGYNA AVCSARWQGT GKVPGGDNEY VDIILSDTPL GQDDRLIIDI DFRSHFEIAR AVDSYQRIME SLPVVYVGTV
201: ARLNQFLQVM VDAAKFSLKQ NSMPLPPWRS LNYLQSKWLS PYKRHLGPIN QEGPGMFSPG LHKQCAENLK RLQFALHAEQ EAERFVKKKK KSRERIRIHG
301: AP
101: DLHSVKSGTC NASCIRFYLA KLLRLSGYNA AVCSARWQGT GKVPGGDNEY VDIILSDTPL GQDDRLIIDI DFRSHFEIAR AVDSYQRIME SLPVVYVGTV
201: ARLNQFLQVM VDAAKFSLKQ NSMPLPPWRS LNYLQSKWLS PYKRHLGPIN QEGPGMFSPG LHKQCAENLK RLQFALHAEQ EAERFVKKKK KSRERIRIHG
301: AP
001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
Arabidopsis Description
At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.