Factsheet for TraesCS3B01G600900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G536200.1	Wheat	plastid	97.13	97.98
TraesCS3A01G530700.1	Wheat	plastid	95.42	96.52
HORVU3Hr1G115940.1	Barley	plastid	93.12	76.83
Os01t0973600-01	Rice	plastid	71.63	74.18
Zm00001d041955_P001	Maize	plastid	70.2	71.22
VIT_13s0019g01100.t01	Wine grape	nucleus	43.55	55.88
KRH70457	Soybean	cytosol	47.56	53.9
GSMUA_Achr10P...	Banana	mitochondrion	53.3	53.45
KRH01670	Soybean	nucleus	46.7	52.92
AT2G39650.1	Thale cress	cytosol	42.69	51.2
CDY24955	Canola	cytosol	43.55	50.33
CDY07644	Canola	cytosol	43.27	50.17
Bra000140.1-P	Field mustard	cytosol	43.27	50.0
PGSC0003DMT400025041	Potato	cytosol	39.54	44.23
Solyc06g005480.2.1	Tomato	cytosol	39.26	43.91
GSMUA_Achr5P07100_001	Banana	cytosol	53.58	36.17
TraesCS3B01G456400.1	Wheat	cytosol	20.92	25.35
TraesCS3B01G307800.1	Wheat	nucleus	20.06	25.09
TraesCS3B01G442800.1	Wheat	cytosol	16.91	24.58
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	20.92	23.47
TraesCS4B01G187500.1	Wheat	mitochondrion	18.91	22.07
TraesCS5B01G442200.1	Wheat	plastid	22.92	21.33
TraesCS1B01G352000.1	Wheat	nucleus	17.48	21.33

Protein Annotations

EnsemblPlants:TraesCS3B01G600900.1	EnsemblPlantsGene:TraesCS3B01G600900	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19	PFAM:PF04720
SEG:seg	TIGRFAMs:TIGR01615	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3B:+:821693457..821696333

Molecular Weight (calculated)

38274.9 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.332

Length

349 amino acids

Sequence
(BLAST)

001: MMLVAKEFGA LSPPGAVAAQ RRWAPPATAR VSPRGGGGSS PVGDLWLRTR GGADGPGGSQ HGSHESDMDL AMLVSDFLEG GGGGGGGGDS RGSSDGEAGG
101: LHDLAHLADK ISMYKQAGDE KENELLSVVH SLLFSIHETE LQDFVRGQCT GSCIRHLLVK LLRYSGYDAA VCVSKWQGFD KIPGGDHEYI DVIIDNDLTG
201: PERLIIDIDF RSHFEIARAV DPYGTLLDSL PVVYVGTLPR LKQFLNVMAD AAKWSLKQNS MPLPPWRSLS YLQMKWHSKY ERKGLHSEQQ EFQGASPSHA
301: LCFGHLKRLK SSLRLELETG RLLMMPVMQA GTKRTAMYER RRRRSLLSF

Best Arabidopsis Sequence Match ( AT2G39650.1 )
(BLAST)

001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N

Arabidopsis Description

At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.