CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01670	Soybean	nucleus	95.45	95.45
VIT_13s0019g01100.t01	Wine grape	nucleus	59.74	67.65
AT2G39650.1	Thale cress	cytosol	53.25	56.36
CDY24955	Canola	cytosol	52.92	53.97
CDY07644	Canola	cytosol	52.27	53.49
Bra000140.1-P	Field mustard	cytosol	52.27	53.31
Os01t0973600-01	Rice	plastid	57.14	52.23
GSMUA_Achr10P...	Banana	mitochondrion	57.14	50.57
Solyc06g005480.2.1	Tomato	cytosol	50.32	49.68
PGSC0003DMT400025041	Potato	cytosol	50.0	49.36
TraesCS3B01G600900.1	Wheat	plastid	53.9	47.56
TraesCS3A01G530700.1	Wheat	plastid	53.25	47.54
TraesCS3D01G536200.1	Wheat	plastid	53.25	47.4
Zm00001d041955_P001	Maize	plastid	52.6	47.09
HORVU3Hr1G115940.1	Barley	plastid	54.22	39.48
GSMUA_Achr5P07100_001	Banana	cytosol	57.47	34.24
KRH37828	Soybean	cytosol	12.66	25.83
KRH43403	Soybean	cytosol	21.75	25.28
KRH51155	Soybean	cytosol	23.38	24.24
KRH71351	Soybean	cytosol	27.92	23.96
KRG95606	Soybean	cytosol	27.92	23.82
KRH59552	Soybean	cytosol	20.78	23.53
KRH11519	Soybean	mitochondrion	22.73	22.44
KRH32089	Soybean	cytosol	24.68	22.42
KRH07392	Soybean	nucleus	21.75	22.41
KRH36535	Soybean	endoplasmic reticulum, golgi	23.7	21.73
KRH69065	Soybean	cytosol	25.65	21.58
KRH25597	Soybean	nucleus	19.16	20.56
KRH31637	Soybean	cytosol	25.32	20.37
KRH46613	Soybean	mitochondrion, nucleus	18.83	20.35
KRH34359	Soybean	plastid	25.32	20.16
KRG92439	Soybean	plastid	25.32	19.85
KRH10888	Soybean	mitochondrion	19.16	19.67
KRH27801	Soybean	cytosol	17.53	19.64
KRH21430	Soybean	mitochondrion, nucleus	19.16	19.54
KRH77753	Soybean	cytosol	17.21	19.49
KRH50053	Soybean	mitochondrion	18.51	17.7
KRH20449	Soybean	mitochondrion	17.53	16.41

Protein Annotations

EMBL:ACUP02000774	EnsemblPlants:KRH70457	EnsemblPlantsGene:GLYMA_02G091500	EntrezGene:100780208	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF19	PFAM:PF04720	ProteinID:KRH70457	ProteinID:KRH70457.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI000233743F	UniProt:I1JDN4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:8098079..8101844

Molecular Weight (calculated)

34547.8 Da

IEP (calculated)

6.428

GRAVY (calculated)

-0.379

Length

308 amino acids

Sequence
(BLAST)

001: MDCRVCVATG GDLWVRVGGG GEIGGGFSHE SEHDLALMVS DFLENGSSGA ESWCSSDSDS GHSDFAQLAE RIQICKLSVA QHESDLLSVV HSLIRSMNET
101: NLQVMNSGPC YASCIRFYLV KLMRLSGYDA GVCASKWQGS GKVPGGDHEY IDIIIDNNSG SSERLIVDID FRSHFEIARA VDSYDRILNS LPVVYVGSFT
201: RLKQFLGIME EATRSSLKQN SMPLPPWRSL AYLQAKWQSP YERYTHSEGN NISDSDCFDH KQCCGHLKRL QSCLQSGIEI DRLLKPRNSE SNWRMKPERW
301: RHPLFRPL

Best Arabidopsis Sequence Match ( AT2G39650.1 )
(BLAST)

001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N

Arabidopsis Description

At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.