CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32089	Soybean	cytosol	86.35	91.45
KRG95606	Soybean	cytosol	61.84	61.5
VIT_00s0179g00360.t01	Wine grape	cytosol	63.23	57.18
CDX93300	Canola	cytosol	46.52	55.67
AT2G38820.2	Thale cress	cytosol	47.91	55.48
Bra017099.1-P	Field mustard	cytosol	45.96	55.0
CDY18366	Canola	cytosol	45.96	55.0
Bra000098.1-P	Field mustard	cytosol	47.08	54.69
CDY14428	Canola	cytosol	46.8	54.02
CDY07696	Canola	cytosol	46.52	53.53
KRH34359	Soybean	plastid	55.15	51.16
GSMUA_Achr3P15230_001	Banana	cytosol	47.91	51.04
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	50.42	50.42
KRG92439	Soybean	plastid	54.87	50.13
GSMUA_Achr8P26930_001	Banana	cytosol	48.19	49.01
GSMUA_Achr8P20590_001	Banana	plastid	49.03	48.48
GSMUA_Achr4P14880_001	Banana	mitochondrion	35.1	47.73
GSMUA_Achr8P04470_001	Banana	cytosol	47.91	46.74
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	49.58	46.6
AT3G54550.1	Thale cress	plastid	37.33	46.53
KRH69065	Soybean	cytosol	47.08	46.17
KRH31637	Soybean	cytosol	48.19	45.17
GSMUA_Achr9P25590_001	Banana	plastid	50.14	44.23
EER95459	Sorghum	plastid	36.21	43.48
PGSC0003DMT400049773	Potato	nucleus	51.81	42.86
Os03t0162500-01	Rice	plastid	36.49	42.67
Zm00001d027763_P001	Maize	plastid	35.65	42.67
Solyc09g065760.2.1	Tomato	cytosol, plastid	51.53	42.53
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	36.77	41.9
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	36.77	41.9
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	36.21	41.8
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	36.21	41.8
Os10t0417800-01	Rice	plastid	34.54	41.2
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	34.26	41.0
EER91615	Sorghum	mitochondrion	33.43	40.96
TraesCS5B01G442200.1	Wheat	plastid	39.28	37.6
TraesCS5D01G446400.1	Wheat	plastid	39.55	37.27
TraesCS5A01G439200.1	Wheat	plastid	38.72	37.07
Zm00001d018962_P001	Maize	mitochondrion, plastid	38.44	36.03
EER93295	Sorghum	plastid	39.0	35.62
Os03t0796600-01	Rice	cytosol, nucleus, plastid	39.28	34.81
Zm00001d034444_P002	Maize	plastid	39.0	34.57
HORVU5Hr1G105950.2	Barley	plastid	38.72	34.15
KRH43403	Soybean	cytosol	24.51	33.21
Zm00001d007820_P002	Maize	plastid	37.05	33.17
KRH37828	Soybean	cytosol	13.37	31.79
KRH59552	Soybean	cytosol	23.96	31.62
EER98072	Sorghum	cytosol, plastid	37.88	28.69
KRH51155	Soybean	cytosol	23.4	28.28
KRH70457	Soybean	cytosol	23.96	27.92
KRH01670	Soybean	nucleus	23.12	26.95
KRH25597	Soybean	nucleus	19.5	24.39
KRH11519	Soybean	mitochondrion	21.17	24.36
KRH36535	Soybean	endoplasmic reticulum, golgi	22.28	23.81
KRH07392	Soybean	nucleus	19.78	23.75
KRH46613	Soybean	mitochondrion, nucleus	18.38	23.16
KRH50053	Soybean	mitochondrion	20.06	22.36
KRH21430	Soybean	mitochondrion, nucleus	18.66	22.19
KRH10888	Soybean	mitochondrion	18.38	22.0
KRH77753	Soybean	cytosol	16.16	21.32
KRH20449	Soybean	mitochondrion	19.22	20.97
KRH27801	Soybean	cytosol	15.6	20.36

Protein Annotations

EMBL:ACUP02000891	EnsemblPlants:KRH71351	EnsemblPlantsGene:GLYMA_02G143100	EntrezGene:100781835	InterPro:PDDEXK-like	ncoils:Coil
PANTHER:PTHR31579	PANTHER:PTHR31579:SF5	PFAM:PF04720	ProteinID:KRH71350.1	ProteinID:KRH71351	ProteinID:KRH71351.1
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0002336BF7	UniProt:I1JF56	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr2:-:14757825..14760121

Molecular Weight (calculated)

40285.6 Da

IEP (calculated)

7.380

GRAVY (calculated)

-0.640

Length

359 amino acids

Sequence
(BLAST)

001: MKIQPIDSQV LAEGTQLELA KPVVKSRLKR LLERQFSGVL RNSAPEKIAG DDETLNGSND FEPSSACLAK MVQSFIEESH EKHSASHHRN RCNCFNRNYD
101: DSSDEDSNSF GGSGDSNFSS GEACETLKGL VACASVRERN LLADTAKIVE KNKICKRKDN FCRKILTDEL LTLGYDASIC KSRWEKSPSY PAGEYEYIDV
201: MMGKERILID IDFRSEFEIA RSTKAYKTIL QNLPYIFVGT CERLQSIVAL VSEAAKQSLK KKGMHVPPWR RAEYVKAKWL SPYTRTTNSA NDIKEEKKKE
301: EQQQQLLKEN LFAAESESSG EDNTAVVEWK PPELKPKGSL SGVKVVTGLA VAFHNDNNP

Best Arabidopsis Sequence Match ( AT3G22970.1 )
(BLAST)

001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP

Arabidopsis Description

At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.