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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P24940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G22970.1 GSMUA_Achr10P... AT4G15560.1 24104567
AT3G22970.1 GSMUA_Achr3P24940_001 AT4G15560.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P15230_001 Banana cytosol 77.34 81.01
GSMUA_Achr8P04470_001 Banana cytosol 74.79 71.74
GSMUA_Achr4P14880_001 Banana mitochondrion 47.88 64.02
GSMUA_Achr4P21100_001 Banana cytosol, plastid 54.96 54.04
GSMUA_Achr8P20590_001 Banana plastid 53.82 52.34
GSMUA_Achr9P10660_001 Banana cytosol, plastid 53.54 49.48
VIT_05s0020g04500.t01 Wine grape nucleus 53.82 49.22
Bra001897.1-P Field mustard cytosol 46.18 48.95
CDX92970 Canola cytosol 46.18 48.95
KRH71351 Soybean cytosol 49.01 48.19
CDY18366 Canola cytosol 40.79 48.0
PGSC0003DMT400041951 Potato cytosol 50.14 47.84
KRH32089 Soybean cytosol 45.89 47.79
Bra017099.1-P Field mustard cytosol 40.51 47.67
CDX93300 Canola cytosol 39.94 47.0
CDY29750 Canola nucleus, plastid 47.03 46.89
Bra036877.1-P Field mustard cytosol, plastid 47.03 46.89
KRH34359 Soybean plastid 51.27 46.77
Bra000098.1-P Field mustard cytosol 40.79 46.6
KRG92439 Soybean plastid 51.84 46.56
CDY07696 Canola cytosol 41.08 46.47
VIT_00s0179g00360.t01 Wine grape cytosol 52.12 46.35
CDX94877 Canola cytosol 45.33 46.11
AT2G38820.2 Thale cress cytosol 40.23 45.81
CDY16266 Canola nucleus 46.18 45.66
Bra033896.1-P Field mustard cytosol 47.31 45.5
PGSC0003DMT400015576 Potato cytosol, plastid 50.99 45.45
CDY14428 Canola cytosol 39.94 45.34
GSMUA_Achr9P25590_001 Banana plastid 52.12 45.21
AT4G14620.1 Thale cress cytosol 43.34 44.87
Solyc06g053910.2.1 Tomato cytosol, plastid 49.29 44.73
Solyc09g082980.2.1 Tomato nucleus 50.42 44.72
AT3G22970.1 Thale cress plastid 46.46 44.32
KRG95606 Soybean cytosol 45.33 44.32
CDY10330 Canola cytosol 45.61 43.99
KRH69065 Soybean cytosol 45.04 43.44
KRH31637 Soybean cytosol 46.74 43.08
AT3G54550.1 Thale cress plastid 33.71 41.32
CDY10329 Canola plastid 44.19 41.27
Solyc09g065760.2.1 Tomato cytosol, plastid 45.61 37.01
PGSC0003DMT400049773 Potato nucleus 45.33 36.87
GSMUA_Achr7P03040_001 Banana nucleus 21.25 28.96
GSMUA_Achr6P21070_001 Banana cytosol 24.36 28.86
GSMUA_Achr7P24960_001 Banana cytosol 20.4 26.28
GSMUA_Achr4P02600_001 Banana nucleus 20.4 25.9
GSMUA_Achr3P03980_001 Banana cytosol 20.96 25.78
GSMUA_Achr3P31780_001 Banana cytosol 20.96 25.78
GSMUA_Achr10P... Banana mitochondrion 24.36 24.71
GSMUA_Achr11P... Banana cytosol, mitochondrion 14.45 24.52
GSMUA_Achr5P07100_001 Banana cytosol 24.36 16.63
Protein Annotations
EnsemblPlants:GSMUA_Achr8P26930_001EnsemblPlants:GSMUA_Achr8T26930_001EnsemblPlantsGene:GSMUA_Achr8G26930_001InterPro:PDDEXK-likePANTHER:PTHR31579PANTHER:PTHR31579:SF19
PFAM:PF04720SEG:segTIGRFAMs:TIGR01615UniParc:UPI00029682CFUniProt:M0TTZ6MapMan:35.2
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G26930_001]
Coordinates
chr8:+:30282091..30283355
Molecular Weight (calculated)
38558.8 Da
IEP (calculated)
7.409
GRAVY (calculated)
-0.403
Length
353 amino acids
Sequence
(BLAST)
001: MPFPTKIQPI DVIAVGRSDL AKPVQKSRLK RLFERQFPSV LRISSAERLA GGADLELSSI CLDKMVRNFM EDNNGEQTSY RSGRSRCNCF HGNCRDSSDD
101: DLDLLPSSFN SGDPPMVSAA EVVKGLVVSA SLVERNLLAD ASSVVEKNKN CKRKDEQMKA VANGLRLLGY DASISKSRWE KTPSFPAGEH EYIDVIVAGD
201: RLLVDVDFRS EFEIARSTKS YAAVLQSLPP VFVGKEDQVD QIVAVVSEAA QQSLKKKGLH FPPWRKPEYM RSKWLAPYER SIPLADPPPA AQAEETGESD
301: GKAKSEKSAE GKSSAVLVVS AASAWEPPEV KPKAVHEGAK VVTGLTSVLS EKP
Best Arabidopsis Sequence Match ( AT3G22970.1 )
(BLAST)
001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
Arabidopsis Description
At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.