Factsheet for Bra036877.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29750	Canola	nucleus, plastid	99.72	99.72
AT4G14620.1	Thale cress	cytosol	70.62	73.31
Bra033896.1-P	Field mustard	cytosol	69.21	66.76
Bra001897.1-P	Field mustard	cytosol	61.86	65.77
VIT_05s0020g04500.t01	Wine grape	nucleus	61.86	56.74
KRH34359	Soybean	plastid	61.3	56.07
KRG92439	Soybean	plastid	60.45	54.45
KRH69065	Soybean	cytosol	55.08	53.28
PGSC0003DMT400041951	Potato	cytosol	54.24	51.89
KRH31637	Soybean	cytosol	55.65	51.44
PGSC0003DMT400015576	Potato	cytosol, plastid	56.5	50.51
Solyc09g082980.2.1	Tomato	nucleus	56.78	50.5
Solyc06g053910.2.1	Tomato	cytosol, plastid	53.95	49.1
GSMUA_Achr3P15230_001	Banana	cytosol	46.61	48.96
GSMUA_Achr4P14880_001	Banana	mitochondrion	36.44	48.86
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	48.59	47.91
GSMUA_Achr8P26930_001	Banana	cytosol	46.89	47.03
Bra017099.1-P	Field mustard	cytosol	38.98	46.0
GSMUA_Achr8P20590_001	Banana	plastid	46.05	44.9
GSMUA_Achr8P04470_001	Banana	cytosol	46.61	44.84
EER91615	Sorghum	mitochondrion	36.72	44.37
Bra000098.1-P	Field mustard	cytosol	38.14	43.69
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	36.72	43.33
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	46.05	42.67
EER95459	Sorghum	plastid	35.31	41.81
Os10t0417800-01	Rice	plastid	35.31	41.53
Os03t0162500-01	Rice	plastid	35.88	41.37
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	35.59	40.51
Zm00001d027763_P001	Maize	plastid	34.18	40.33
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	35.31	40.19
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	35.59	40.0
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	35.31	39.68
GSMUA_Achr9P25590_001	Banana	plastid	45.48	39.56
TraesCS5A01G439200.1	Wheat	plastid	41.53	39.2
TraesCS5B01G442200.1	Wheat	plastid	41.24	38.93
TraesCS5D01G446400.1	Wheat	plastid	40.96	38.06
Zm00001d018962_P001	Maize	mitochondrion, plastid	40.11	37.08
EER93295	Sorghum	plastid	40.4	36.39
Os03t0796600-01	Rice	cytosol, nucleus, plastid	41.53	36.3
Zm00001d007820_P002	Maize	plastid	40.96	36.16
HORVU5Hr1G105950.2	Barley	plastid	41.24	35.87
Zm00001d034444_P002	Maize	plastid	40.11	35.06
Bra040373.1-P	Field mustard	plastid	18.93	34.9
EER98072	Sorghum	cytosol, plastid	40.4	30.17
Bra029641.1-P	Field mustard	nucleus	24.29	28.67
Bra015689.1-P	Field mustard	nucleus	19.49	26.85
Bra013223.1-P	Field mustard	nucleus	21.19	26.6
Bra015691.1-P	Field mustard	cytosol	19.21	25.86
Bra015690.1-P	Field mustard	nucleus	19.49	25.75
Bra000140.1-P	Field mustard	cytosol	20.62	24.17
Bra019736.1-P	Field mustard	mitochondrion	19.49	23.55
Bra016797.1-P	Field mustard	cytosol	19.49	23.39
Bra031136.1-P	Field mustard	nucleus	18.93	22.79
Bra036492.1-P	Field mustard	nucleus	18.64	22.22
Bra026262.1-P	Field mustard	nucleus	18.36	21.74
Bra024209.1-P	Field mustard	nucleus	17.8	21.36

Protein Annotations

EnsemblPlants:Bra036877.1	EnsemblPlants:Bra036877.1-P	EnsemblPlantsGene:Bra036877	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI00025451D6	UniProt:M4F717	MapMan:35.2

Description

AT4G14620 (E=6e-107) | unknown protein

Coordinates

chrA01:+:12460526..12461742

Molecular Weight (calculated)

39573.6 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.501

Length

354 amino acids

Sequence
(BLAST)

001: MKIQPTETDF PASRDSAKPV LKSRLKRLLD RPFTNVLRSS NSDKPLIEAQ HGREVVSEFE PSSVVLAKMV QNYMEDSNER QAKNGRNRCN CFNGNNDDSS
101: DDEFDLFGCS VESFNDAYDH FKSLIPCASL MERNLSADAA KILEKNKSVK RKDDLRKLVV DGLSALGYDS SICKSKWDKT RSIPAGEYEY IDVIVNGERV
201: LIDVDFRSEF EIARQTNAYK ALLQSLPFVF VGKSDRISQI VSMVSEAARQ SLKKKGMHFP PWRKADYMRA KWLSSYTRNS GDNVPEPMVS SAVVAETGID
301: CSEIELSFEE KFLASVNSSS SPLKSVAGND DVAEAVEREA KVVTGLASLF KENP

Best Arabidopsis Sequence Match ( AT4G14620.1 )
(BLAST)

001: MMKIQPINND LPANRVESST KPVLKSRLKR LLDRPFTRIS NSEKLLISGD GVVAGTEFEP SLAKMVQNYM EENNDKQTKN GRNTHRCNCF NGNNDISDDE
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H

Arabidopsis Description

Uncharacterized protein At4g14620 [Source:UniProtKB/TrEMBL;Acc:Q8L7H9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.