Factsheet for Bra000098.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07696	Canola	cytosol	98.06	97.12
CDY14428	Canola	cytosol	97.09	96.46
Bra017099.1-P	Field mustard	cytosol	73.46	75.67
AT2G38820.2	Thale cress	cytosol	73.14	72.9
KRH71351	Soybean	cytosol	54.69	47.08
KRH32089	Soybean	cytosol	50.49	46.02
VIT_00s0179g00360.t01	Wine grape	cytosol	58.9	45.84
GSMUA_Achr4P14880_001	Banana	mitochondrion	38.19	44.7
KRG95606	Soybean	cytosol	51.78	44.32
Bra001897.1-P	Field mustard	cytosol	47.57	44.14
GSMUA_Achr3P15230_001	Banana	cytosol	47.9	43.92
Bra033896.1-P	Field mustard	cytosol	48.87	41.14
GSMUA_Achr8P26930_001	Banana	cytosol	46.6	40.79
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	46.93	40.39
GSMUA_Achr8P04470_001	Banana	cytosol	47.57	39.95
GSMUA_Achr8P20590_001	Banana	plastid	46.6	39.67
Os10t0417800-01	Rice	plastid	37.54	38.54
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	38.51	38.26
Bra036877.1-P	Field mustard	cytosol, plastid	43.69	38.14
EER95459	Sorghum	plastid	36.57	37.79
Os03t0162500-01	Rice	plastid	37.54	37.78
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	38.51	37.78
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	37.86	37.62
EER91615	Sorghum	mitochondrion	35.6	37.54
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	45.95	37.17
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	37.86	37.14
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	35.92	37.0
Zm00001d027763_P001	Maize	plastid	35.6	36.67
GSMUA_Achr9P25590_001	Banana	plastid	46.93	35.63
PGSC0003DMT400049773	Potato	nucleus	49.19	35.02
Solyc09g065760.2.1	Tomato	cytosol, plastid	48.87	34.71
TraesCS5B01G442200.1	Wheat	plastid	39.16	32.27
TraesCS5A01G439200.1	Wheat	plastid	38.19	31.47
TraesCS5D01G446400.1	Wheat	plastid	38.51	31.23
Os03t0796600-01	Rice	cytosol, nucleus, plastid	39.16	29.88
Bra040373.1-P	Field mustard	plastid	18.45	29.69
HORVU5Hr1G105950.2	Barley	plastid	38.51	29.24
EER93295	Sorghum	plastid	36.57	28.75
Zm00001d034444_P002	Maize	plastid	37.22	28.4
Zm00001d018962_P001	Maize	mitochondrion, plastid	33.66	27.15
Bra013223.1-P	Field mustard	nucleus	23.95	26.24
Zm00001d007820_P002	Maize	plastid	33.66	25.94
Bra000140.1-P	Field mustard	cytosol	24.27	24.83
Bra015689.1-P	Field mustard	nucleus	19.74	23.74
Bra029641.1-P	Field mustard	nucleus	22.98	23.67
Bra019736.1-P	Field mustard	mitochondrion	22.01	23.21
Bra016797.1-P	Field mustard	cytosol	21.68	22.71
Bra015691.1-P	Field mustard	cytosol	19.09	22.43
Bra015690.1-P	Field mustard	nucleus	19.42	22.39
EER98072	Sorghum	cytosol, plastid	33.98	22.15
Bra026262.1-P	Field mustard	nucleus	18.77	19.4
Bra031136.1-P	Field mustard	nucleus	18.45	19.39
Bra024209.1-P	Field mustard	nucleus	17.8	18.64
Bra036492.1-P	Field mustard	nucleus	17.8	18.52

Protein Annotations

EnsemblPlants:Bra000098.1	EnsemblPlants:Bra000098.1-P	EnsemblPlantsGene:Bra000098	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF5
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0002540118	UniProt:M4C7C0	MapMan:35.2

Description

AT2G38820 (E=3e-114) | unknown protein

Coordinates

chrA03:+:9236560..9237656

Molecular Weight (calculated)

34661.5 Da

IEP (calculated)

8.188

GRAVY (calculated)

-0.458

Length

309 amino acids

Sequence
(BLAST)

001: MPFHTKIQPI EASEEEIPFP ETMKQMPKSR LKRLFERQFS LKNTSEAAPP PLSRGGSGDF EPSSVCLGKM VVNFIEDNNN GEKQRCGRSR CSCFNWSGTE
101: SSDDESDWSD DLGASSSREG RVTLKSLVLC SSMCEKSLMA DVTKIVETSK NCKRKDESCL KIFVANELVS LGYDAALCKS RWEKSSSYPA GEYKYVDVII
201: DGERLLIDID FKPNFEIARA TKTYKSILQT LPCIFVGKVD RLQKIIILVC EGAKKSLKKK GLHVPPWRRA EYVKSKWISP YVRGPDAEED KQEPVDVLTK
301: SVGSIAFGV

Best Arabidopsis Sequence Match ( AT2G38820.2 )
(BLAST)

001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV

Arabidopsis Description

Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.