Factsheet for Os10t0417800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0408900-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22970.1	Os05t0408900-03	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91615	Sorghum	mitochondrion	76.74	78.84
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	76.74	77.0
Os03t0162500-01	Rice	plastid	73.42	71.99
GSMUA_Achr8P20590_001	Banana	plastid	50.83	42.15
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	49.5	41.5
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	52.16	41.1
Bra000098.1-P	Field mustard	cytosol	38.54	37.54
AT2G38820.2	Thale cress	cytosol	38.54	37.42
CDY07696	Canola	cytosol	38.54	37.18
AT3G54550.1	Thale cress	plastid	35.22	36.81
CDY14428	Canola	cytosol	37.87	36.66
Bra001897.1-P	Field mustard	cytosol	40.2	36.34
CDX92970	Canola	cytosol	40.2	36.34
GSMUA_Achr9P25590_001	Banana	plastid	48.84	36.12
Os03t0796600-01	Rice	cytosol, nucleus, plastid	47.84	35.56
CDX93300	Canola	cytosol	35.22	35.33
Bra017099.1-P	Field mustard	cytosol	35.22	35.33
CDY18366	Canola	cytosol	35.22	35.33
Bra036877.1-P	Field mustard	cytosol, plastid	41.53	35.31
CDY29750	Canola	nucleus, plastid	41.2	35.03
KRH71351	Soybean	cytosol	41.2	34.54
KRG95606	Soybean	cytosol	41.2	34.35
CDX94877	Canola	cytosol	39.2	34.01
CDY16266	Canola	nucleus	40.2	33.89
VIT_05s0020g04500.t01	Wine grape	nucleus	43.19	33.68
KRH32089	Soybean	cytosol	37.87	33.63
Bra033896.1-P	Field mustard	cytosol	40.86	33.52
Os01t0915000-01	Rice	cytosol	32.23	33.11
PGSC0003DMT400041951	Potato	cytosol	40.2	32.7
KRG92439	Soybean	plastid	42.52	32.57
KRH34359	Soybean	plastid	41.86	32.56
VIT_00s0179g00360.t01	Wine grape	cytosol	42.52	32.24
AT3G22970.1	Thale cress	plastid	39.2	31.89
CDY10330	Canola	cytosol	38.54	31.69
PGSC0003DMT400015576	Potato	cytosol, plastid	41.53	31.57
AT4G14620.1	Thale cress	cytosol	34.88	30.79
CDY10329	Canola	plastid	38.54	30.69
Solyc09g082980.2.1	Tomato	nucleus	40.2	30.4
Solyc06g053910.2.1	Tomato	cytosol, plastid	39.2	30.33
KRH31637	Soybean	cytosol	37.54	29.5
KRH69065	Soybean	cytosol	35.55	29.23
PGSC0003DMT400049773	Potato	nucleus	39.87	27.65
Solyc09g065760.2.1	Tomato	cytosol, plastid	39.2	27.13
Os11t0437600-01	Rice	plastid	26.91	26.47
Os05t0519300-01	Rice	cytosol	25.91	25.49
Os01t0879600-00	Rice	plastid	24.25	24.17
Os02t0720400-00	Rice	nucleus	25.25	22.96
Os01t0973600-01	Rice	plastid	25.25	22.55

Protein Annotations

EMBL:AK067822	EnsemblPlants:Os10t0417800-01	EnsemblPlantsGene:Os10g0417800	EntrezGene:4348637	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF8	PFAM:PF04720	ProteinID:AAP53781.1	ProteinID:BAF26524.1	ProteinID:BAT10867.1	RefSeq:XP_015612855.1
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI00001A3BB6	UniProt:Q7XEK8	MapMan:35.2	:

Description

Protein of unknown function DUF506, plant family protein. (Os10t0417800-01)

Coordinates

chr10:-:14657778..14659426

Molecular Weight (calculated)

32042.8 Da

IEP (calculated)

6.999

GRAVY (calculated)

-0.347

Length

301 amino acids

Sequence
(BLAST)

001: MRAAAAPDPS PAPARSMLKR LFDRQLLRVS PAERIVAVGG GEKDEVEPSS VCLDGMVRSF LEDGSGVGAA VERAGGHGAR RCNCFHGGGS SDDDDDEDDA
101: AASSDVAETI KGLVHCATLR ERNLLADVCG HVERHRAGGA RRRELLGLVA ASLRAAGHDA AVCVSRWDKS PTHPAGEHAY VDVLLPPASD RGARERVLVD
201: VDFRSAFEVA RPTKAYRALL QRLPAVFVGK DDRLRLLVAA SADAARASLR KRGLHLPPWR KPEYMRAKWL SPYDREPAPP DEASASAAAA EVAGEEAPAA
301: A

Best Arabidopsis Sequence Match ( AT2G38820.2 )
(BLAST)

001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV

Arabidopsis Description

Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.