CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29750	Canola	nucleus, plastid	96.08	96.89
AT4G14620.1	Thale cress	cytosol	70.31	73.61
CDX92970	Canola	cytosol	61.62	66.07
CDY10330	Canola	cytosol	67.23	65.57
CDX94877	Canola	cytosol	62.75	64.55
CDY10329	Canola	plastid	62.47	58.99
VIT_05s0020g04500.t01	Wine grape	nucleus	62.47	57.77
KRH34359	Soybean	plastid	61.62	56.85
KRG92439	Soybean	plastid	60.78	55.22
KRH69065	Soybean	cytosol	55.46	54.1
KRH31637	Soybean	cytosol	56.02	52.22
PGSC0003DMT400041951	Potato	cytosol	53.78	51.89
PGSC0003DMT400015576	Potato	cytosol, plastid	55.74	50.25
Solyc09g082980.2.1	Tomato	nucleus	56.02	50.25
Solyc06g053910.2.1	Tomato	cytosol, plastid	53.5	49.1
GSMUA_Achr4P14880_001	Banana	mitochondrion	35.85	48.48
GSMUA_Achr3P15230_001	Banana	cytosol	45.38	48.07
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	47.9	47.63
CDX93300	Canola	cytosol	39.22	46.67
CDY18366	Canola	cytosol	39.22	46.67
GSMUA_Achr8P26930_001	Banana	cytosol	45.66	46.18
GSMUA_Achr8P20590_001	Banana	plastid	45.66	44.9
GSMUA_Achr8P04470_001	Banana	cytosol	46.22	44.84
CDY14428	Canola	cytosol	38.38	44.05
CDY07696	Canola	cytosol	38.38	43.91
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	46.22	43.19
EER91615	Sorghum	mitochondrion	35.29	43.0
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	35.29	42.0
EER95459	Sorghum	plastid	33.89	40.47
Os03t0162500-01	Rice	plastid	34.73	40.39
Os10t0417800-01	Rice	plastid	33.89	40.2
GSMUA_Achr9P25590_001	Banana	plastid	45.38	39.8
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	34.17	39.23
TraesCS5B01G442200.1	Wheat	plastid	41.18	39.2
TraesCS5A01G439200.1	Wheat	plastid	41.18	39.2
Zm00001d027763_P001	Maize	plastid	32.77	39.0
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	33.89	38.91
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	34.17	38.73
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	33.89	38.41
TraesCS5D01G446400.1	Wheat	plastid	40.62	38.06
Zm00001d018962_P001	Maize	mitochondrion, plastid	40.06	37.34
EER93295	Sorghum	plastid	40.34	36.64
Os03t0796600-01	Rice	cytosol, nucleus, plastid	40.9	36.05
HORVU5Hr1G105950.2	Barley	plastid	40.9	35.87
Zm00001d034444_P002	Maize	plastid	40.34	35.56
Zm00001d007820_P002	Maize	plastid	39.78	35.41
EER98072	Sorghum	cytosol, plastid	40.34	30.38
CDY60822	Canola	nucleus	23.25	27.76
CDY35924	Canola	nucleus	23.25	27.67
CDY28060	Canola	cytosol, nucleus, plastid	22.97	27.33
CDY34904	Canola	nucleus	22.97	27.15
CDX88346	Canola	nucleus	19.05	26.46
CDX87538	Canola	nucleus	19.05	26.46
CDY15101	Canola	nucleus	20.45	26.26
CDY52283	Canola	nucleus	20.73	26.24
CDX87539	Canola	nucleus	19.05	25.37
CDX88345	Canola	nucleus	19.05	25.37
CDX88344	Canola	cytosol	18.77	25.28
CDX87540	Canola	cytosol	18.49	25.1
CDY07644	Canola	cytosol	20.17	23.92
CDY53353	Canola	mitochondrion	19.33	23.55
CDY24955	Canola	cytosol	19.89	23.51
CDY21027	Canola	cytosol	19.33	23.39
CDY30048	Canola	mitochondrion	19.05	23.05
CDY31234	Canola	cytosol	18.77	22.79
CDX81975	Canola	nucleus	18.21	21.96
CDY13861	Canola	nucleus	18.21	21.96
CDX92863	Canola	nucleus	17.93	21.69
CDY05782	Canola	nucleus	17.93	21.55
CDY31947	Canola	nucleus	17.93	21.55
CDY18979	Canola	nucleus	17.65	21.07
CDY49659	Canola	nucleus	17.65	21.07
CDY29898	Canola	nucleus	17.37	21.02

Protein Annotations

EnsemblPlants:CDY16266	EnsemblPlantsGene:GSBRNA2T00090749001	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19	PFAM:PF04720
ProteinID:CDY16266	ProteinID:CDY16266.1	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0004EC85AA	UniProt:A0A078FT40
MapMan:35.2	:	:	:	:	:

Description

BnaC01g23010DBnaC01g23010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT40]

Coordinates

chrLK032062:+:209104..210665

Molecular Weight (calculated)

39854.9 Da

IEP (calculated)

5.611

GRAVY (calculated)

-0.509

Length

357 amino acids

Sequence
(BLAST)

001: MKIQPTETDI PASRDSAKPV LKSRLKRLLD RPFTNVLRSS NSDKPLIEAQ HGRERDGVVS EFEPSSVVLA KMVQNYMEES NERQAKNGRN RCNCFNGNND
101: DSSDDEFDLF GCSVESFNDA YDHFKSLIPC ASVMERNLSA DAAKILEKNK SVKRKDDLRK LVVDGLSALG YDSSICKSKW DKTRSIPAGE YEFIDVIVNG
201: ERLLIDVDFR SEFDIARQTN AYKALLQSLP FVFVGKSDRI SQIVSMVSEA ARQSLKKKGM HFPPWRKADY MRAKWLSSYT RNSGDNAPEP MVSSAFVAET
301: GIDCSEIELS FEEKFLASVN SPSSPLKSVA GSDDVAEAVE REAKVVTGLA SLFKENP

Best Arabidopsis Sequence Match ( AT4G14620.1 )
(BLAST)

001: MMKIQPINND LPANRVESST KPVLKSRLKR LLDRPFTRIS NSEKLLISGD GVVAGTEFEP SLAKMVQNYM EENNDKQTKN GRNTHRCNCF NGNNDISDDE
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H

Arabidopsis Description

Uncharacterized protein At4g14620 [Source:UniProtKB/TrEMBL;Acc:Q8L7H9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.