Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000098.1-P | Field mustard | cytosol | 96.46 | 97.09 |
| CDY07696 | Canola | cytosol | 96.14 | 95.83 |
| CDX93300 | Canola | cytosol | 74.6 | 77.33 |
| CDY18366 | Canola | cytosol | 73.63 | 76.33 |
| AT2G38820.2 | Thale cress | cytosol | 72.67 | 72.9 |
| KRH71351 | Soybean | cytosol | 54.02 | 46.8 |
| KRH32089 | Soybean | cytosol | 49.84 | 45.72 |
| VIT_00s0179g00360.t01 | Wine grape | cytosol | 58.2 | 45.59 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 37.94 | 44.7 |
| KRG95606 | Soybean | cytosol | 51.45 | 44.32 |
| CDX92970 | Canola | cytosol | 46.95 | 43.84 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 47.27 | 43.62 |
| CDX94877 | Canola | cytosol | 48.23 | 43.23 |
| CDY10330 | Canola | cytosol | 47.91 | 40.71 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 46.3 | 40.11 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 47.27 | 39.95 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 45.34 | 39.94 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 46.3 | 39.67 |
| CDY10329 | Canola | plastid | 47.59 | 39.15 |
| CDY29750 | Canola | nucleus, plastid | 44.05 | 38.7 |
| CDY16266 | Canola | nucleus | 44.05 | 38.38 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 38.26 | 38.26 |
| Os10t0417800-01 | Rice | plastid | 36.66 | 37.87 |
| EER95459 | Sorghum | plastid | 36.33 | 37.79 |
| Os03t0162500-01 | Rice | plastid | 37.3 | 37.78 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 38.26 | 37.78 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 37.62 | 37.62 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 45.66 | 37.17 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 37.62 | 37.14 |
| EER91615 | Sorghum | mitochondrion | 34.73 | 36.86 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 35.37 | 36.67 |
| Zm00001d027763_P001 | Maize | plastid | 35.05 | 36.33 |
| PGSC0003DMT400049773 | Potato | nucleus | 49.2 | 35.25 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 45.98 | 35.14 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 48.87 | 34.94 |
| TraesCS5B01G442200.1 | Wheat | plastid | 38.59 | 32.0 |
| TraesCS5A01G439200.1 | Wheat | plastid | 37.62 | 31.2 |
| TraesCS5D01G446400.1 | Wheat | plastid | 37.94 | 30.97 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 38.59 | 29.63 |
| HORVU5Hr1G105950.2 | Barley | plastid | 37.94 | 28.99 |
| EER93295 | Sorghum | plastid | 36.33 | 28.75 |
| Zm00001d034444_P002 | Maize | plastid | 36.98 | 28.4 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 33.44 | 27.15 |
| CDY15101 | Canola | nucleus | 23.47 | 26.26 |
| Zm00001d007820_P002 | Maize | plastid | 33.44 | 25.94 |
| CDY52283 | Canola | nucleus | 23.15 | 25.53 |
| CDY60822 | Canola | nucleus | 24.12 | 25.08 |
| CDY34904 | Canola | nucleus | 24.12 | 24.83 |
| CDY07644 | Canola | cytosol | 23.79 | 24.58 |
| CDY24955 | Canola | cytosol | 23.79 | 24.5 |
| CDX88346 | Canola | nucleus | 19.61 | 23.74 |
| CDY35924 | Canola | nucleus | 22.51 | 23.33 |
| CDY53353 | Canola | mitochondrion | 21.86 | 23.21 |
| CDY30048 | Canola | mitochondrion | 21.86 | 23.05 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 22.19 | 23.0 |
| CDX87538 | Canola | nucleus | 18.97 | 22.96 |
| CDX87539 | Canola | nucleus | 19.61 | 22.76 |
| CDX88345 | Canola | nucleus | 19.29 | 22.39 |
| CDY21027 | Canola | cytosol | 21.22 | 22.37 |
| EER98072 | Sorghum | cytosol, plastid | 33.76 | 22.15 |
| CDX87540 | Canola | cytosol | 18.65 | 22.05 |
| CDX88344 | Canola | cytosol | 18.65 | 21.89 |
| CDY31234 | Canola | cytosol | 20.58 | 21.77 |
| CDY49659 | Canola | nucleus | 18.33 | 19.06 |
| CDY13861 | Canola | nucleus | 18.01 | 18.92 |
| CDY18979 | Canola | nucleus | 18.01 | 18.73 |
| CDX92863 | Canola | nucleus | 17.68 | 18.64 |
| CDY29898 | Canola | nucleus | 17.68 | 18.64 |
| CDX81975 | Canola | nucleus | 17.68 | 18.58 |
| CDY05782 | Canola | nucleus | 17.36 | 18.18 |
| CDY31947 | Canola | nucleus | 17.36 | 18.18 |
Protein Annotations
| EnsemblPlants:CDY14428 | EnsemblPlantsGene:GSBRNA2T00079097001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF5 | PFAM:PF04720 |
| ProteinID:CDY14428 | ProteinID:CDY14428.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EF3254 | UniProt:A0A078FQ04 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g21670DBnaC03g21670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ04]
Coordinates
chrLK032043:-:287769..289237
Molecular Weight (calculated)
34695.5 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.430
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFHTKIQPV DVSEVEIPFP ETMKQMPKSR LKRLFERQFS LKNTSEAAAP PPPLSRGGSG DFEPSSVCLG KMVVNFIEDN NNGEKQRCGR SRCSCFNWSG
101: TESSGDESDW SDDLGASSSR EGRVTLKSLV LCTSTCEKSL MADVTKIVET SKNCKRKDES CLKIFVANEL VSLGYDAALC KSRWEKSSSY PAGEYKYVDV
201: IIDGERLLID IDFKPNFEIA RATKTYKSIL QTLPSIFVGK VDRLQKIIIL VCEGAKNSLK KKGLHVPPWR RAEYVKSKWI SPYVRGPDAE EDKQEPVDVL
301: TKSVGSIAFG V
101: TESSGDESDW SDDLGASSSR EGRVTLKSLV LCTSTCEKSL MADVTKIVET SKNCKRKDES CLKIFVANEL VSLGYDAALC KSRWEKSSSY PAGEYKYVDV
201: IIDGERLLID IDFKPNFEIA RATKTYKSIL QTLPSIFVGK VDRLQKIIIL VCEGAKNSLK KKGLHVPPWR RAEYVKSKWI SPYVRGPDAE EDKQEPVDVL
301: TKSVGSIAFG V
001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
Arabidopsis Description
Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.