Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93300 | Canola | cytosol | 72.9 | 75.33 |
| CDY18366 | Canola | cytosol | 72.58 | 75.0 |
| Bra017099.1-P | Field mustard | cytosol | 72.26 | 74.67 |
| Bra000098.1-P | Field mustard | cytosol | 72.9 | 73.14 |
| CDY14428 | Canola | cytosol | 72.9 | 72.67 |
| CDY07696 | Canola | cytosol | 72.58 | 72.12 |
| AT3G54550.1 | Thale cress | plastid | 45.48 | 48.96 |
| KRH71351 | Soybean | cytosol | 55.48 | 47.91 |
| VIT_00s0179g00360.t01 | Wine grape | cytosol | 60.32 | 47.1 |
| KRG95606 | Soybean | cytosol | 53.23 | 45.71 |
| KRH32089 | Soybean | cytosol | 49.68 | 45.43 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 37.42 | 43.94 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 47.74 | 43.92 |
| AT4G14620.1 | Thale cress | cytosol | 47.1 | 42.82 |
| AT3G22970.1 | Thale cress | plastid | 50.97 | 42.7 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 47.74 | 41.23 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 47.74 | 40.77 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 45.81 | 40.23 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 47.1 | 39.67 |
| EER91615 | Sorghum | mitochondrion | 37.1 | 39.25 |
| Os03t0162500-01 | Rice | plastid | 38.71 | 39.09 |
| Os10t0417800-01 | Rice | plastid | 37.42 | 38.54 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 37.1 | 38.33 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 38.39 | 38.26 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 46.77 | 37.96 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 38.06 | 37.94 |
| EER95459 | Sorghum | plastid | 36.45 | 37.79 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 38.39 | 37.78 |
| Zm00001d027763_P001 | Maize | plastid | 36.45 | 37.67 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 37.74 | 37.14 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 48.06 | 36.61 |
| PGSC0003DMT400049773 | Potato | nucleus | 50.65 | 36.18 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 50.0 | 35.63 |
| TraesCS5B01G442200.1 | Wheat | plastid | 41.61 | 34.4 |
| TraesCS5A01G439200.1 | Wheat | plastid | 40.65 | 33.6 |
| TraesCS5D01G446400.1 | Wheat | plastid | 40.65 | 33.07 |
| EER93295 | Sorghum | plastid | 40.32 | 31.81 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 41.29 | 31.6 |
| Zm00001d034444_P002 | Maize | plastid | 40.32 | 30.86 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 37.74 | 30.55 |
| HORVU5Hr1G105950.2 | Barley | plastid | 40.0 | 30.47 |
| AT3G25240.1 | Thale cress | cytosol | 26.77 | 29.54 |
| Zm00001d007820_P002 | Maize | plastid | 36.77 | 28.43 |
| AT3G07350.1 | Thale cress | nucleus | 26.13 | 27.18 |
| AT1G62420.1 | Thale cress | cytosol | 24.19 | 26.5 |
| AT1G77145.1 | Thale cress | cytosol | 21.94 | 26.15 |
| AT2G39650.1 | Thale cress | cytosol | 24.19 | 25.77 |
| EER98072 | Sorghum | cytosol, plastid | 38.06 | 24.89 |
| AT1G77160.1 | Thale cress | cytosol | 19.68 | 23.19 |
| AT1G12030.1 | Thale cress | mitochondrion | 20.32 | 21.36 |
| AT4G32480.1 | Thale cress | nucleus | 18.39 | 19.86 |
| AT2G20670.1 | Thale cress | nucleus | 17.1 | 18.03 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818464 | ProteinID:AEC09589.1 | ArrayExpress:AT2G38820 | EnsemblPlantsGene:AT2G38820 | RefSeq:AT2G38820 |
| TAIR:AT2G38820 | RefSeq:AT2G38820-TAIR-G | EnsemblPlants:AT2G38820.2 | TAIR:AT2G38820.2 | Unigene:At.26599 | UniProt:F4ITY1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003899 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032774 | RefSeq:NP_973636.1 | InterPro:PDDEXK-like |
| PFAM:PF04720 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF5 | TIGRFAMs:TIGR01615 | UniParc:UPI000017A6FF |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
Coordinates
chr2:+:16221815..16223746
Molecular Weight (calculated)
34635.7 Da
IEP (calculated)
8.531
GRAVY (calculated)
-0.423
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.