Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G12030.1 | Thale cress | mitochondrion | 63.6 | 61.02 |
| KRH11519 | Soybean | mitochondrion | 42.76 | 38.78 |
| Solyc11g012120.1.1 | Tomato | cytosol | 39.58 | 37.71 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 39.22 | 36.88 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 42.76 | 36.01 |
| KRH51155 | Soybean | cytosol | 37.46 | 35.69 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 27.92 | 27.53 |
| EES07354 | Sorghum | cytosol | 29.68 | 27.18 |
| AT3G25240.1 | Thale cress | cytosol | 26.5 | 26.69 |
| Zm00001d051691_P001 | Maize | cytosol | 27.92 | 25.16 |
| TraesCS6A01G283100.1 | Wheat | cytosol | 26.86 | 24.44 |
| TraesCS6D01G263600.1 | Wheat | cytosol | 27.56 | 24.38 |
| AT2G38820.2 | Thale cress | cytosol | 26.5 | 24.19 |
| AT3G07350.1 | Thale cress | nucleus | 25.44 | 24.16 |
| AT3G54550.1 | Thale cress | plastid | 24.38 | 23.96 |
| AT1G77145.1 | Thale cress | cytosol | 21.2 | 23.08 |
| Os02t0720400-00 | Rice | nucleus | 26.15 | 22.36 |
| AT1G77160.1 | Thale cress | cytosol | 19.79 | 21.29 |
| AT2G39650.1 | Thale cress | cytosol | 21.2 | 20.62 |
| AT4G32480.1 | Thale cress | nucleus | 20.49 | 20.21 |
| AT4G14620.1 | Thale cress | cytosol | 22.26 | 18.48 |
| AT2G20670.1 | Thale cress | nucleus | 19.08 | 18.37 |
| AT3G22970.1 | Thale cress | plastid | 23.67 | 18.11 |
Protein Annotations
| MapMan:35.2 | EntrezGene:842540 | UniProt:A0A178WEW9 | ProteinID:AAF70846.1 | ProteinID:AEE33966.1 | EMBL:AK117760 |
| EMBL:AK175261 | ArrayExpress:AT1G62420 | EnsemblPlantsGene:AT1G62420 | RefSeq:AT1G62420 | TAIR:AT1G62420 | RefSeq:AT1G62420-TAIR-G |
| EnsemblPlants:AT1G62420.1 | TAIR:AT1G62420.1 | GO:GO:0003674 | RefSeq:NP_176432.2 | UniProt:O48807 | ProteinID:OAP16015.1 |
| InterPro:PDDEXK-like | PFAM:PF04720 | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 | TIGRFAMs:TIGR01615 | UniParc:UPI00000AC046 |
Description
DUF506 family protein (DUF506) [Source:UniProtKB/TrEMBL;Acc:O48807]
Coordinates
chr1:-:23102777..23104756
Molecular Weight (calculated)
32220.4 Da
IEP (calculated)
7.464
GRAVY (calculated)
-0.447
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEIQGRFKR IESAFNVAAA RVHPPCDNSS GSDHSPDLSD LVASFIEKEG QIVLREEEET SSDDNNLEDV NERLRKLLEG LSCGEERMRI LSATMEVAGT
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.