Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24955 | Canola | cytosol | 89.69 | 86.42 |
| CDY07644 | Canola | cytosol | 88.66 | 85.71 |
| Bra000140.1-P | Field mustard | cytosol | 88.66 | 85.43 |
| VIT_13s0019g01100.t01 | Wine grape | nucleus | 54.3 | 58.09 |
| KRH70457 | Soybean | cytosol | 56.36 | 53.25 |
| KRH01670 | Soybean | nucleus | 54.98 | 51.95 |
| Os01t0973600-01 | Rice | plastid | 54.3 | 46.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 54.3 | 45.4 |
| Zm00001d041955_P001 | Maize | plastid | 51.55 | 43.6 |
| Solyc06g005480.2.1 | Tomato | cytosol | 46.05 | 42.95 |
| TraesCS3A01G530700.1 | Wheat | plastid | 50.86 | 42.9 |
| TraesCS3D01G536200.1 | Wheat | plastid | 50.86 | 42.77 |
| TraesCS3B01G600900.1 | Wheat | plastid | 51.2 | 42.69 |
| PGSC0003DMT400025041 | Potato | cytosol | 45.36 | 42.31 |
| HORVU3Hr1G115940.1 | Barley | plastid | 51.89 | 35.7 |
| GSMUA_Achr5P07100_001 | Banana | cytosol | 51.89 | 29.21 |
| AT3G07350.1 | Thale cress | nucleus | 26.12 | 25.5 |
| AT3G25240.1 | Thale cress | cytosol | 24.4 | 25.27 |
| AT3G54550.1 | Thale cress | plastid | 24.05 | 24.31 |
| AT2G38820.2 | Thale cress | cytosol | 25.77 | 24.19 |
| AT1G77145.1 | Thale cress | cytosol | 19.59 | 21.92 |
| AT1G62420.1 | Thale cress | cytosol | 20.62 | 21.2 |
| AT4G14620.1 | Thale cress | cytosol | 23.71 | 20.23 |
| AT1G77160.1 | Thale cress | cytosol | 18.21 | 20.15 |
| AT3G22970.1 | Thale cress | plastid | 25.09 | 19.73 |
| AT1G12030.1 | Thale cress | mitochondrion | 18.9 | 18.64 |
| AT4G32480.1 | Thale cress | nucleus | 18.21 | 18.47 |
| AT2G20670.1 | Thale cress | nucleus | 18.56 | 18.37 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818548 | ProteinID:AAB97120.1 | ProteinID:AAM14920.1 | ProteinID:AEC09702.1 | EMBL:AF325085 |
| ArrayExpress:AT2G39650 | EnsemblPlantsGene:AT2G39650 | RefSeq:AT2G39650 | TAIR:AT2G39650 | RefSeq:AT2G39650-TAIR-G | EnsemblPlants:AT2G39650.1 |
| TAIR:AT2G39650.1 | EMBL:BT024705 | RefSeq:NP_181495.1 | UniProt:O48813 | InterPro:PDDEXK-like | PFAM:PF04720 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF19 | TIGRFAMs:TIGR01615 |
| UniParc:UPI00000A778C | SEG:seg | : | : | : | : |
Description
At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
Coordinates
chr2:-:16527730..16529494
Molecular Weight (calculated)
32537.8 Da
IEP (calculated)
6.788
GRAVY (calculated)
-0.381
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.