Factsheet for HORVU3Hr1G115940.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G536200.1	Wheat	plastid	77.31	94.51
TraesCS3A01G530700.1	Wheat	plastid	76.6	93.91
TraesCS3B01G600900.1	Wheat	plastid	76.83	93.12
Os01t0973600-01	Rice	plastid	58.87	73.89
Zm00001d041955_P001	Maize	plastid	57.21	70.35
VIT_13s0019g01100.t01	Wine grape	nucleus	36.41	56.62
KRH70457	Soybean	cytosol	39.48	54.22
KRH01670	Soybean	nucleus	39.48	54.22
GSMUA_Achr10P...	Banana	mitochondrion	44.21	53.74
AT2G39650.1	Thale cress	cytosol	35.7	51.89
CDY24955	Canola	cytosol	35.7	50.0
CDY07644	Canola	cytosol	35.46	49.83
Bra000140.1-P	Field mustard	cytosol	35.46	49.67
PGSC0003DMT400025041	Potato	cytosol	33.1	44.87
Solyc06g005480.2.1	Tomato	cytosol	32.86	44.55
GSMUA_Achr5P07100_001	Banana	cytosol	44.92	36.75
HORVU3Hr1G071220.1	Barley	nucleus	16.78	27.1
HORVU3Hr1G091440.2	Barley	cytosol	13.71	23.87
HORVU1Hr1G076120.1	Barley	nucleus	15.13	22.78
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	16.78	22.54
HORVU4Hr1G054810.1	Barley	mitochondrion	14.66	21.16
HORVU3Hr1G093260.1	Barley	plastid	18.44	19.26
HORVU5Hr1G105950.2	Barley	plastid	18.44	19.16

Protein Annotations

EnsemblPlants:HORVU3Hr1G115940.1	EnsemblPlantsGene:HORVU3Hr1G115940	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19	PFAM:PF04720
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000B47ADD5	UniProt:A0A287MTD3	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr3H:+:694559170..694561635

Molecular Weight (calculated)

46681.9 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.399

Length

423 amino acids

Sequence
(BLAST)

001: STRPPRWPFP NSPPPIPLPP GSSSLREIPT GEEEPTPNSP SQSPIRIRQV RRLIAPARSN PTGHVLLAGR SFVGMMLVAK EFGALSPPGA AQRRWAPPST
101: ARVSPRGGSP VAVGDLWLRT RGGGDGPGSG SSQHGSHESD MDLAMLVSDF LEGGPGGACG DSRGSSDGEP GGLHDLAHLA DKISMYKQAG DDKENELLSV
201: VHSLLFSIHE TELQDFVRGQ CTGSCIRHLL VKLLRYSGYD AAVCVSKWQG FDKIPGGDHE YIDVIVDNDL TGPERLIIDI DFRSHFEIAR AVDPYGTLLD
301: SLPVVYVGTL PRLKQFLNVM VDAAKWSLKQ NSMPLPPWRS LSYLQMKWHS KYERRGLHSE QQDFFQGASP SHVLCFGHLK RLKSSLRLEL ETARRLMMPV
401: NIQIGSKRTA MYERRRRRSL LSF

Best Arabidopsis Sequence Match ( AT2G39650.1 )
(BLAST)

001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N

Arabidopsis Description

At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.