Factsheet for HORVU5Hr1G105950.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G060610.9

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22970.1	HORVU1Hr1G060610.9	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G442200.1	Wheat	plastid	86.49	93.87
TraesCS5A01G439200.1	Wheat	plastid	85.26	92.53
TraesCS5D01G446400.1	Wheat	plastid	86.0	91.86
Os03t0796600-01	Rice	cytosol, nucleus, plastid	73.71	74.07
EER93295	Sorghum	plastid	69.53	72.01
Zm00001d034444_P002	Maize	plastid	68.8	69.14
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	45.21	51.25
GSMUA_Achr8P20590_001	Banana	plastid	44.47	49.86
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	45.45	48.43
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	35.87	46.35
GSMUA_Achr9P25590_001	Banana	plastid	44.23	44.23
VIT_05s0020g04500.t01	Wine grape	nucleus	40.54	42.75
PGSC0003DMT400041951	Potato	cytosol	37.84	41.62
Bra036877.1-P	Field mustard	cytosol, plastid	35.87	41.24
CDY29750	Canola	nucleus, plastid	35.63	40.96
CDY16266	Canola	nucleus	35.87	40.9
KRH34359	Soybean	plastid	38.57	40.57
AT2G38820.2	Thale cress	cytosol	30.47	40.0
KRG92439	Soybean	plastid	38.57	39.95
CDX92970	Canola	cytosol	32.68	39.94
Bra001897.1-P	Field mustard	cytosol	32.68	39.94
PGSC0003DMT400015576	Potato	cytosol, plastid	38.82	39.9
KRH69065	Soybean	cytosol	35.87	39.89
AT4G14620.1	Thale cress	cytosol	33.42	39.88
Solyc09g082980.2.1	Tomato	nucleus	38.33	39.2
CDY18366	Canola	cytosol	28.75	39.0
KRH32089	Soybean	cytosol	32.43	38.94
AT3G54550.1	Thale cress	plastid	27.52	38.89
KRH71351	Soybean	cytosol	34.15	38.72
Bra017099.1-P	Field mustard	cytosol	28.5	38.67
KRH31637	Soybean	cytosol	36.36	38.64
Bra000098.1-P	Field mustard	cytosol	29.24	38.51
CDY07696	Canola	cytosol	29.48	38.46
Solyc06g053910.2.1	Tomato	cytosol, plastid	36.61	38.3
KRG95606	Soybean	cytosol	33.91	38.23
CDY14428	Canola	cytosol	28.99	37.94
VIT_00s0179g00360.t01	Wine grape	cytosol	36.85	37.78
CDX94877	Canola	cytosol	32.19	37.75
CDX93300	Canola	cytosol	27.76	37.67
Bra033896.1-P	Field mustard	cytosol	33.66	37.33
CDY10330	Canola	cytosol	33.42	37.16
AT3G22970.1	Thale cress	plastid	33.66	37.03
CDY10329	Canola	plastid	31.7	34.13
PGSC0003DMT400049773	Potato	nucleus	33.66	31.57
Solyc09g065760.2.1	Tomato	cytosol, plastid	33.66	31.49
HORVU1Hr1G076120.1	Barley	nucleus	21.38	30.96
HORVU3Hr1G071220.1	Barley	nucleus	19.9	30.92
HORVU3Hr1G091440.2	Barley	cytosol	17.69	29.63
HORVU4Hr1G054810.1	Barley	mitochondrion	20.15	27.99
HORVU3Hr1G093260.1	Barley	plastid	21.38	21.48
HORVU3Hr1G115940.1	Barley	plastid	19.16	18.44

Protein Annotations

EnsemblPlants:HORVU5Hr1G105950.2	EnsemblPlantsGene:HORVU5Hr1G105950	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19	PFAM:PF04720
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000B47FF20	UniProt:A0A287SLE9	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr5H:-:622958749..622961018

Molecular Weight (calculated)

42944.3 Da

IEP (calculated)

8.903

GRAVY (calculated)

-0.229

Length

407 amino acids

Sequence
(BLAST)

001: MPFQLKAGAG HHHHGAMDGK PPPPPPLAPA PTPRVSRLRR LLVRVSASER IAVAGDGKEE RPAAGGVEAE VGSVGLDRMV LSFMEDSAAV ERPPRGRCNC
101: FNGSNYEESD DEEGFFLPSG QASAPAPAAA GDTLEALKVL EFPHGTPPLP PKLGKAATNL PSGCLLSLCV QGLVQGASVA ERNLLADASR IAERCGRTCK
201: GKAECRRAVA DGLRALGYDA AVCKSRWEKT SSYPAGEHEY IDAVVGDGAR LIVEVHFRSE FEVARSTKAY RAALQALPPL FVGTSDRLGK IVSVVAEAAR
301: QSMKKKGLHF PPWRKPEYMR AKWLSPHVRA GDKAAAPSPT AQATATAVSA ASFAGEFELL FGMDHSGVTS APGEKITVVV SPWPPTEDAA SKQKPRAKVV
401: TGLAAVL

Best Arabidopsis Sequence Match ( AT4G14620.1 )
(BLAST)

001: MMKIQPINND LPANRVESST KPVLKSRLKR LLDRPFTRIS NSEKLLISGD GVVAGTEFEP SLAKMVQNYM EENNDKQTKN GRNTHRCNCF NGNNDISDDE
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H

Arabidopsis Description

Uncharacterized protein At4g14620 [Source:UniProtKB/TrEMBL;Acc:Q8L7H9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.