Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18366 | Canola | cytosol | 99.0 | 99.0 |
| Bra000098.1-P | Field mustard | cytosol | 75.67 | 73.46 |
| AT2G38820.2 | Thale cress | cytosol | 74.67 | 72.26 |
| KRH71351 | Soybean | cytosol | 55.0 | 45.96 |
| VIT_00s0179g00360.t01 | Wine grape | cytosol | 60.0 | 45.34 |
| KRH32089 | Soybean | cytosol | 50.0 | 44.25 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 49.33 | 43.92 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 38.33 | 43.56 |
| Bra001897.1-P | Field mustard | cytosol | 47.67 | 42.94 |
| KRG95606 | Soybean | cytosol | 51.33 | 42.66 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 48.67 | 40.67 |
| Bra033896.1-P | Field mustard | cytosol | 49.67 | 40.6 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 47.67 | 40.51 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 48.33 | 39.94 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 48.33 | 39.4 |
| Bra036877.1-P | Field mustard | cytosol, plastid | 46.0 | 38.98 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 47.33 | 37.17 |
| EER91615 | Sorghum | mitochondrion | 35.33 | 36.18 |
| PGSC0003DMT400049773 | Potato | nucleus | 52.33 | 36.18 |
| Os03t0162500-01 | Rice | plastid | 37.0 | 36.16 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 52.0 | 35.86 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 35.67 | 35.67 |
| EER95459 | Sorghum | plastid | 35.33 | 35.45 |
| Os10t0417800-01 | Rice | plastid | 35.33 | 35.22 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 36.33 | 35.05 |
| Zm00001d027763_P001 | Maize | plastid | 35.0 | 35.0 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 36.67 | 34.92 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 36.0 | 34.73 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 47.0 | 34.64 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 36.0 | 34.29 |
| TraesCS5B01G442200.1 | Wheat | plastid | 40.0 | 32.0 |
| Bra040373.1-P | Field mustard | plastid | 20.0 | 31.25 |
| TraesCS5A01G439200.1 | Wheat | plastid | 39.0 | 31.2 |
| TraesCS5D01G446400.1 | Wheat | plastid | 39.0 | 30.71 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 40.0 | 29.63 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 37.0 | 28.98 |
| EER93295 | Sorghum | plastid | 37.67 | 28.75 |
| HORVU5Hr1G105950.2 | Barley | plastid | 38.67 | 28.5 |
| Zm00001d034444_P002 | Maize | plastid | 37.33 | 27.65 |
| Zm00001d007820_P002 | Maize | plastid | 36.67 | 27.43 |
| Bra013223.1-P | Field mustard | nucleus | 23.67 | 25.18 |
| Bra029641.1-P | Field mustard | nucleus | 25.0 | 25.0 |
| Bra000140.1-P | Field mustard | cytosol | 24.67 | 24.5 |
| Bra015689.1-P | Field mustard | nucleus | 20.33 | 23.74 |
| EER98072 | Sorghum | cytosol, plastid | 37.33 | 23.63 |
| Bra019736.1-P | Field mustard | mitochondrion | 23.0 | 23.55 |
| Bra016797.1-P | Field mustard | cytosol | 22.67 | 23.05 |
| Bra015691.1-P | Field mustard | cytosol | 20.0 | 22.81 |
| Bra015690.1-P | Field mustard | nucleus | 19.67 | 22.01 |
| Bra031136.1-P | Field mustard | nucleus | 18.67 | 19.05 |
| Bra026262.1-P | Field mustard | nucleus | 18.33 | 18.39 |
| Bra036492.1-P | Field mustard | nucleus | 18.0 | 18.18 |
| Bra024209.1-P | Field mustard | nucleus | 17.67 | 17.97 |
Protein Annotations
| EnsemblPlants:Bra017099.1 | EnsemblPlants:Bra017099.1-P | EnsemblPlantsGene:Bra017099 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF5 |
| PFAM:PF04720 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI00025449D5 | UniProt:M4DKR8 | MapMan:35.2 |
Description
AT2G38820 (E=2e-101) | unknown protein
Coordinates
chrA04:+:16615630..16616603
Molecular Weight (calculated)
33764.7 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.412
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFHTKIQPI DLSEDLPTMK QMPKSRLKRL FERQFSIKNA TVGEFDAPPL SRGNSGDFEP SSVCLAKMVV NFMEDNKEEE EKQRCGRSRC SCFTGSGTES
101: SDDESEWSDD VKCSSGEACV MLKSLVLCTS ISERNVMADV SKIVETSNRK DQSCLKNLVS VLVRLGYDAA ICKSRWEKTP SYPTGEYEYV DVIMEGKRLL
201: IDINFKSNFE IARATKTYKS ILQTIPCIFV GKADRLQRII MLLSKAAKQS LKKKGLHVPP WRRAEYVKSK WLSTYVRGEE KQETVDMLSA SGGGSIVFGV
101: SDDESEWSDD VKCSSGEACV MLKSLVLCTS ISERNVMADV SKIVETSNRK DQSCLKNLVS VLVRLGYDAA ICKSRWEKTP SYPTGEYEYV DVIMEGKRLL
201: IDINFKSNFE IARATKTYKS ILQTIPCIFV GKADRLQRII MLLSKAAKQS LKKKGLHVPP WRRAEYVKSK WLSTYVRGEE KQETVDMLSA SGGGSIVFGV
001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
Arabidopsis Description
Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.