Factsheet for Bra019736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53353	Canola	mitochondrion	98.98	98.98
Bra016797.1-P	Field mustard	cytosol	81.57	81.02
AT1G12030.1	Thale cress	mitochondrion	76.79	76.27
Solyc11g012120.1.1	Tomato	cytosol	42.32	41.75
KRH11519	Soybean	mitochondrion	42.66	40.06
KRH51155	Soybean	cytosol	39.93	39.39
VIT_12s0059g01640.t01	Wine grape	nucleus	39.59	38.54
KRH36535	Soybean	endoplasmic reticulum, golgi	43.34	37.8
Bra040373.1-P	Field mustard	plastid	21.16	32.29
EES07354	Sorghum	cytosol	31.06	29.45
GSMUA_Achr3P03980_001	Banana	cytosol	28.67	29.27
TraesCS6A01G283100.1	Wheat	cytosol	28.67	27.01
Zm00001d051691_P001	Maize	cytosol	28.67	26.75
TraesCS6D01G263600.1	Wheat	cytosol	29.01	26.56
Bra013223.1-P	Field mustard	nucleus	25.26	26.24
Bra029641.1-P	Field mustard	nucleus	26.62	26.0
Os02t0720400-00	Rice	nucleus	28.67	25.38
Bra017099.1-P	Field mustard	cytosol	23.55	23.0
Bra000098.1-P	Field mustard	cytosol	23.21	22.01
Bra015689.1-P	Field mustard	nucleus	19.11	21.79
Bra015691.1-P	Field mustard	cytosol	19.45	21.67
Bra015690.1-P	Field mustard	nucleus	19.11	20.9
Bra001897.1-P	Field mustard	cytosol	23.21	20.42
Bra000140.1-P	Field mustard	cytosol	20.82	20.2
Bra024209.1-P	Field mustard	nucleus	20.14	20.0
Bra033896.1-P	Field mustard	cytosol	24.57	19.62
Bra036877.1-P	Field mustard	cytosol, plastid	23.55	19.49
Bra036492.1-P	Field mustard	nucleus	19.45	19.19
Bra026262.1-P	Field mustard	nucleus	19.11	18.73
Bra031136.1-P	Field mustard	nucleus	18.43	18.37

Protein Annotations

EnsemblPlants:Bra019736.1	EnsemblPlants:Bra019736.1-P	EnsemblPlantsGene:Bra019736	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF15
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000253ED76	UniProt:M4DT93	MapMan:35.2

Description

AT1G12030 (E=1e-107) | unknown protein

Coordinates

chrA06:+:4719393..4720920

Molecular Weight (calculated)

33769.8 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.716

Length

293 amino acids

Sequence
(BLAST)

001: MVQIPRRFNR FAAAFDVVAA RTRPPCDSSS GSDHFPEETQ DLWDLIESFI DREVKVLSGE VPPGEENDDK SDADDDDDED VKERLREILE NHGGGGERRR
101: IIDEVVNASE LVGEKRYLMA YLRKKGFDAG LCKSRWERFG KNTAGKYEYV DVNEGDKNRF IVETNLAGEF EITRPTTRYI SLLSQLPRVF VGTPEELKQL
201: VRIMSFEVRR SMKRAEIHVP PWRRNGYMQA KWFGHYKRTS NEVVTRVWSC GCGPRVGFEE SVETATFFGS KEVEWKRNGL KKVGQLTVAF KQQ

Best Arabidopsis Sequence Match ( AT1G12030.1 )
(BLAST)

001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF

Arabidopsis Description

At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.