CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051691_P001	Maize	cytosol	86.41	85.03
TraesCS6D01G263600.1	Wheat	cytosol	60.52	58.44
TraesCS6A01G283100.1	Wheat	cytosol	58.25	57.88
Os02t0720400-00	Rice	nucleus	60.19	56.19
GSMUA_Achr3P03980_001	Banana	cytosol	39.16	42.16
CDY21027	Canola	cytosol	30.42	31.86
CDY30048	Canola	mitochondrion	30.42	31.86
Bra016797.1-P	Field mustard	cytosol	30.1	31.53
CDY53353	Canola	mitochondrion	29.77	31.4
CDY31234	Canola	cytosol	29.77	31.29
AT1G12030.1	Thale cress	mitochondrion	29.77	31.19
KRH37828	Soybean	cytosol	15.21	31.13
Bra019736.1-P	Field mustard	mitochondrion	29.45	31.06
AT1G62420.1	Thale cress	cytosol	27.18	29.68
VIT_12s0059g01640.t01	Wine grape	nucleus	28.8	29.57
KRH11519	Soybean	mitochondrion	28.48	28.21
KRH51155	Soybean	cytosol	26.54	27.61
EES04096	Sorghum	cytosol	25.89	27.03
EES01469	Sorghum	nucleus	23.95	26.24
KRH36535	Soybean	endoplasmic reticulum, golgi	27.18	25.0
EES19824	Sorghum	cytosol	24.27	24.92
Solyc11g012120.1.1	Tomato	cytosol	23.95	24.92
EER91615	Sorghum	mitochondrion	22.65	23.89
EER95459	Sorghum	plastid	22.98	23.75
OQU87982	Sorghum	cytosol	21.04	23.13
EER93295	Sorghum	plastid	24.6	19.34
EER98072	Sorghum	cytosol, plastid	28.16	18.35

Protein Annotations

EnsemblPlants:EES07354	EnsemblPlantsGene:SORBI_3004G258500	EntrezGene:8071771	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF15
PFAM:PF04720	ProteinID:EES07354	ProteinID:EES07354.1	RefSeq:XP_002454378.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI0001A85C95	UniProt:C5XZU4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:60408405..60410179

Molecular Weight (calculated)

33108.5 Da

IEP (calculated)

7.501

GRAVY (calculated)

-0.214

Length

309 amino acids

Sequence
(BLAST)

001: MVTMEFSRAY KKATAALDEA ARARLRGPFI GDIAPWSDRA DADDDLMDLV DEFYNGYGEH GTDYGVATKD AVASQTTEWK EALRLTLAEA AADAAAVRIR
101: AEAERIVRGA GPAVVGGGGI GKHLVERLRA RGYDAGLCRS SWERTSSIPA PGTYEYVDVA VGSPPLPSRY IVEVNVAAEF EIARPSAEYQ DLLSSLPPVL
201: VARPGALKEL AAAMCAAAAE SIRGAGMHVP PWRRAPYVQA KWSAQFERME AAVPVAATGP RPEGGPRAAV HARRPGMGKN CGMEMEMGRR QGVMGREALV
301: SVRPLFRGL

Best Arabidopsis Sequence Match ( AT1G12030.1 )
(BLAST)

001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF

Arabidopsis Description

At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.