Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016797.1-P | Field mustard | cytosol | 97.63 | 97.63 |
| CDY31234 | Canola | cytosol | 95.25 | 95.58 |
| CDY53353 | Canola | mitochondrion | 81.36 | 81.91 |
| CDY30048 | Canola | mitochondrion | 80.34 | 80.34 |
| AT1G12030.1 | Thale cress | mitochondrion | 77.97 | 77.97 |
| Solyc11g012120.1.1 | Tomato | cytosol | 40.68 | 40.4 |
| KRH51155 | Soybean | cytosol | 40.34 | 40.07 |
| KRH11519 | Soybean | mitochondrion | 42.37 | 40.06 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 43.05 | 37.8 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 37.63 | 36.88 |
| EES07354 | Sorghum | cytosol | 31.86 | 30.42 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 29.15 | 29.97 |
| TraesCS6A01G283100.1 | Wheat | cytosol | 29.83 | 28.3 |
| CDY35924 | Canola | nucleus | 28.14 | 27.67 |
| TraesCS6D01G263600.1 | Wheat | cytosol | 29.83 | 27.5 |
| Zm00001d051691_P001 | Maize | cytosol | 29.15 | 27.39 |
| CDY15101 | Canola | nucleus | 25.76 | 27.34 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 27.8 | 27.33 |
| CDY52283 | Canola | nucleus | 26.1 | 27.3 |
| CDY60822 | Canola | nucleus | 27.46 | 27.09 |
| CDY34904 | Canola | nucleus | 27.12 | 26.49 |
| Os02t0720400-00 | Rice | nucleus | 29.49 | 26.28 |
| CDX87538 | Canola | nucleus | 21.36 | 24.51 |
| CDX88346 | Canola | nucleus | 21.02 | 24.12 |
| CDX88344 | Canola | cytosol | 21.02 | 23.4 |
| CDY18366 | Canola | cytosol | 23.39 | 23.0 |
| CDX88345 | Canola | nucleus | 20.34 | 22.39 |
| CDX87539 | Canola | nucleus | 20.34 | 22.39 |
| CDX93300 | Canola | cytosol | 22.71 | 22.33 |
| CDX87540 | Canola | cytosol | 19.66 | 22.05 |
| CDY14428 | Canola | cytosol | 22.37 | 21.22 |
| CDY07696 | Canola | cytosol | 22.37 | 21.15 |
| CDY31947 | Canola | nucleus | 21.02 | 20.88 |
| CDY29898 | Canola | nucleus | 20.68 | 20.68 |
| CDY05782 | Canola | nucleus | 20.68 | 20.54 |
| CDX92863 | Canola | nucleus | 20.34 | 20.34 |
| CDY24955 | Canola | cytosol | 20.34 | 19.87 |
| CDX92970 | Canola | cytosol | 22.37 | 19.82 |
| CDY29750 | Canola | nucleus, plastid | 23.73 | 19.77 |
| CDY07644 | Canola | cytosol | 20.0 | 19.6 |
| CDY18979 | Canola | nucleus | 19.66 | 19.4 |
| CDY16266 | Canola | nucleus | 23.39 | 19.33 |
| CDX81975 | Canola | nucleus | 19.32 | 19.26 |
| CDY13861 | Canola | nucleus | 19.32 | 19.26 |
| CDY49659 | Canola | nucleus | 19.32 | 19.06 |
| CDX94877 | Canola | cytosol | 22.03 | 18.73 |
| CDY10330 | Canola | cytosol | 22.71 | 18.31 |
| CDY10329 | Canola | plastid | 22.03 | 17.2 |
Protein Annotations
| EnsemblPlants:CDY21027 | EnsemblPlantsGene:GSBRNA2T00015188001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 | PFAM:PF04720 |
| ProteinID:CDY21027 | ProteinID:CDY21027.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EE754E | UniProt:A0A078G7Q1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA08g24980DBnaA08g24980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7Q1]
Coordinates
chrLK032115:-:363663..365605
Molecular Weight (calculated)
33766.3 Da
IEP (calculated)
8.101
GRAVY (calculated)
-0.572
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEIPRRFNI LAAAFDVEAA RARPPCDSSS GSDHFPDETA DLWDLVESFM DSEVKALPED IPMEDKDDKS DVDDDYEDVK ERLREICENL SGGGERRRII
101: EEVVNAREFV GEKRLLMAYL RDKGFDAGLC KSKWERFGKN TAGKYEYVDV NRGDKNRFIV ETNLASEFEI AKPTTRYLSL LAQLPRVFVG TPEELKKLVR
201: IMCFEIRRSM KRAEIHVPPW RRNAYMQAKW FGHYKRTSNE VVTRVKSCGC GPRVGFEGLV KTATFNGYKE VERKRQGLKV GQLTVAFTGS GVRLS
101: EEVVNAREFV GEKRLLMAYL RDKGFDAGLC KSKWERFGKN TAGKYEYVDV NRGDKNRFIV ETNLASEFEI AKPTTRYLSL LAQLPRVFVG TPEELKKLVR
201: IMCFEIRRSM KRAEIHVPPW RRNAYMQAKW FGHYKRTSNE VVTRVKSCGC GPRVGFEGLV KTATFNGYKE VERKRQGLKV GQLTVAFTGS GVRLS
001: MVEIGGRFIR TAAAFDVAAA RARPPCASSS GSDHSPDDTE DLWDLVESFI DREVETLPED AFQEEEDDKS DEDYEDVKER LREILENHGG EERQRIMDEA
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
101: VNASRVFAGE KRHFMAYLRN KGFDAGLCKS RWEKFGKNTA GKYEYVDVKA GDKNRYIVET NLAGEFEIAR PTTRYLSVLA QVPRVFVGTP EELKQLVRIM
201: CFEIRRSMKR ADIFVPPWRR NGYMQAKWFG HYKRTSNEVV SRVKSCGCGP RVGFEESVKM TTFNGFKDGE MRRSGLKVGQ LTVAFNGSEV GLQIF
Arabidopsis Description
At1g12030 [Source:UniProtKB/TrEMBL;Acc:O65376]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.