Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G283100.1 | Wheat | cytosol | 90.0 | 92.6 |
| EES07354 | Sorghum | cytosol | 58.44 | 60.52 |
| Zm00001d051691_P001 | Maize | cytosol | 58.75 | 59.87 |
| Os02t0720400-00 | Rice | nucleus | 60.62 | 58.61 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 35.62 | 39.72 |
| Bra016797.1-P | Field mustard | cytosol | 27.5 | 29.83 |
| CDY21027 | Canola | cytosol | 27.5 | 29.83 |
| KRH37828 | Soybean | cytosol | 14.06 | 29.8 |
| TraesCS3D01G416400.1 | Wheat | cytosol | 27.19 | 29.79 |
| CDY31234 | Canola | cytosol | 27.19 | 29.59 |
| CDY53353 | Canola | mitochondrion | 26.88 | 29.35 |
| CDY30048 | Canola | mitochondrion | 26.88 | 29.15 |
| AT1G12030.1 | Thale cress | mitochondrion | 26.88 | 29.15 |
| Bra019736.1-P | Field mustard | mitochondrion | 26.56 | 29.01 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 27.19 | 28.9 |
| TraesCS4D01G188800.1 | Wheat | mitochondrion | 26.88 | 28.76 |
| AT1G62420.1 | Thale cress | cytosol | 24.38 | 27.56 |
| KRH11519 | Soybean | mitochondrion | 26.56 | 27.24 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 24.69 | 27.24 |
| Solyc11g012120.1.1 | Tomato | cytosol | 24.69 | 26.6 |
| KRH51155 | Soybean | cytosol | 24.69 | 26.6 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 22.19 | 25.63 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 19.38 | 25.2 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 26.25 | 25.0 |
| TraesCS5D01G446400.1 | Wheat | plastid | 26.88 | 22.57 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 21.25 | 21.86 |
| TraesCS3D01G536200.1 | Wheat | plastid | 19.38 | 17.92 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G263600.1 | EnsemblPlantsGene:TraesCS6D01G263600 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:372364489..372365553
Molecular Weight (calculated)
33652.6 Da
IEP (calculated)
7.951
GRAVY (calculated)
-0.255
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIPTSQQPP EPPIMGSSPT SYKKATAALD EAARARLRGP FFCGTTPSAS GQEDVDDDDG LVELVHEFYN GYGEDAVAKE AVPPRPASTT WADALRTALA
101: DATADAAAAR IRAEAERAVV GAGPNVAGGE GVRKHVAERL RARGFDAGVC RSSWERSSSV PAGSYEYVDV VITAGASASR YIVEVNIAAE FETARPSAEY
201: QELLLALPTV LVARPETFKE VAAAMCAAAA ESIRGAGMHV PPWRRARYVQ AKWSGKYKRA AAVAAPSGSP WEAGASSTAA AEARPRRGVP ASGGPKHCGM
301: EMGRREMAFG STGRLMFRGL
101: DATADAAAAR IRAEAERAVV GAGPNVAGGE GVRKHVAERL RARGFDAGVC RSSWERSSSV PAGSYEYVDV VITAGASASR YIVEVNIAAE FETARPSAEY
201: QELLLALPTV LVARPETFKE VAAAMCAAAA ESIRGAGMHV PPWRRARYVQ AKWSGKYKRA AAVAAPSGSP WEAGASSTAA AEARPRRGVP ASGGPKHCGM
301: EMGRREMAFG STGRLMFRGL
001: MVEIQGRFKR IESAFNVAAA RVHPPCDNSS GSDHSPDLSD LVASFIEKEG QIVLREEEET SSDDNNLEDV NERLRKLLEG LSCGEERMRI LSATMEVAGT
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
Arabidopsis Description
DUF506 family protein (DUF506) [Source:UniProtKB/TrEMBL;Acc:O48807]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.