Factsheet for Zm00001d051691_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07354	Sorghum	cytosol	85.03	86.41
TraesCS6D01G263600.1	Wheat	cytosol	59.87	58.75
TraesCS6A01G283100.1	Wheat	cytosol	57.96	58.52
Os02t0720400-00	Rice	nucleus	59.24	56.19
GSMUA_Achr3P03980_001	Banana	cytosol	36.94	40.42
KRH37828	Soybean	cytosol	14.65	30.46
Zm00001d012069_P001	Maize	mitochondrion	27.39	29.86
CDY30048	Canola	mitochondrion	27.71	29.49
CDY21027	Canola	cytosol	27.39	29.15
CDY53353	Canola	mitochondrion	27.07	29.01
CDY31234	Canola	cytosol	27.07	28.91
Bra016797.1-P	Field mustard	cytosol	27.07	28.81
AT1G12030.1	Thale cress	mitochondrion	27.07	28.81
Bra019736.1-P	Field mustard	mitochondrion	26.75	28.67
VIT_12s0059g01640.t01	Wine grape	nucleus	27.07	28.24
Zm00001d042631_P001	Maize	cytosol	19.11	28.17
AT1G62420.1	Thale cress	cytosol	25.16	27.92
Zm00001d042376_P001	Maize	cytosol	26.11	27.89
KRH11519	Soybean	mitochondrion	26.75	26.92
KRH51155	Soybean	cytosol	24.52	25.93
Zm00001d043444_P001	Maize	nucleus	23.25	25.7
Solyc11g012120.1.1	Tomato	cytosol	23.25	24.58
KRH36535	Soybean	endoplasmic reticulum, golgi	25.48	23.81
Zm00001d027763_P001	Maize	plastid	22.29	23.33
Zm00001d018962_P001	Maize	mitochondrion, plastid	27.71	22.72
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	21.34	22.33
Zm00001d007820_P002	Maize	plastid	27.07	21.2
Zm00001d041955_P001	Maize	plastid	22.61	20.64
Zm00001d034444_P002	Maize	plastid	24.84	19.26

Protein Annotations

EMBL:BT069360	EnsemblPlants:Zm00001d051691_P001	EnsemblPlants:Zm00001d051691_T001	EnsemblPlantsGene:Zm00001d051691	EntrezGene:100384163	InterPro:PDDEXK-like
PANTHER:PTHR31579	PANTHER:PTHR31579:SF15	PFAM:PF04720	ProteinID:AQK55001.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI000195D186	UniProt:C0PM41	MapMan:35.2	:	:	:

Description

DUF506 family protein

Coordinates

chr4:+:166839700..166841181

Molecular Weight (calculated)

33019.1 Da

IEP (calculated)

9.320

GRAVY (calculated)

-0.235

Length

314 amino acids

Sequence
(BLAST)

001: MEFFPGAYKK ATAALDEAAR ARLRGPFISD TVAPSPAPSG GAADADDDLM DSVDEFYNGY GEHGTDGGAV AKDAVASRAT EWKEALRLTL ADAAADAAAV
101: RIRAEAERIV RDAGPAAVGG GGGIRKHLVE RLRARGYDAR LCRSSWGRTS SIAAPGTYEY VDVTVGSPPP LPSARYIVEV NVAAEFEVAR PSAEYQDLLS
201: SLPPVLVSSP PALKELAAAM CAAAAESIRG AGMHVPPWRR ASYVQAKWSA RFERTEAAAP VAAATGPRAE GGPRAAARAR RPGVGKNCGM EMGRRQGVMG
301: REALVRVRPL FRGF

Best Arabidopsis Sequence Match ( AT1G62420.1 )
(BLAST)

001: MVEIQGRFKR IESAFNVAAA RVHPPCDNSS GSDHSPDLSD LVASFIEKEG QIVLREEEET SSDDNNLEDV NERLRKLLEG LSCGEERMRI LSATMEVAGT
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV

Arabidopsis Description

DUF506 family protein (DUF506) [Source:UniProtKB/TrEMBL;Acc:O48807]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.