Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87982 | Sorghum | cytosol | 72.77 | 55.16 |
| TraesCS3A01G409700.1 | Wheat | cytosol | 60.56 | 53.31 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 60.56 | 52.44 |
| HORVU3Hr1G091440.2 | Barley | cytosol | 59.62 | 52.26 |
| TraesCS3B01G442800.1 | Wheat | cytosol | 58.22 | 51.67 |
| Os01t0879600-00 | Rice | plastid | 64.32 | 45.36 |
| PGSC0003DMT400079089 | Potato | cytosol | 31.46 | 44.08 |
| GSMUA_Achr7P03040_001 | Banana | nucleus | 47.42 | 39.0 |
| Solyc06g054640.1.1 | Tomato | cytosol | 31.46 | 30.18 |
| VIT_04s0044g00970.t01 | Wine grape | cytosol | 35.68 | 28.04 |
| KRH43403 | Soybean | cytosol | 33.8 | 27.17 |
| KRH59552 | Soybean | cytosol | 34.27 | 26.84 |
| VIT_18s0001g15610.t01 | Wine grape | cytosol | 32.39 | 25.0 |
| AT1G77145.1 | Thale cress | cytosol | 26.76 | 21.92 |
| CDX88346 | Canola | nucleus | 26.29 | 21.79 |
| CDX87538 | Canola | nucleus | 26.29 | 21.79 |
| Bra015689.1-P | Field mustard | nucleus | 26.29 | 21.79 |
| AT1G77160.1 | Thale cress | cytosol | 26.29 | 21.29 |
| CDX87539 | Canola | nucleus | 26.29 | 20.9 |
| Bra015690.1-P | Field mustard | nucleus | 26.29 | 20.9 |
| Zm00001d012069_P001 | Maize | mitochondrion | 28.17 | 20.83 |
| Zm00001d042376_P001 | Maize | cytosol | 28.17 | 20.41 |
| CDX88344 | Canola | cytosol | 25.35 | 20.38 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 28.64 | 20.33 |
| CDX88345 | Canola | nucleus | 24.88 | 19.78 |
| CDX87540 | Canola | cytosol | 24.41 | 19.77 |
| Bra015691.1-P | Field mustard | cytosol | 24.41 | 19.77 |
| Zm00001d051691_P001 | Maize | cytosol | 28.17 | 19.11 |
| Zm00001d043444_P001 | Maize | nucleus | 25.35 | 19.01 |
| Zm00001d027763_P001 | Maize | plastid | 26.29 | 18.67 |
| Zm00001d041955_P001 | Maize | plastid | 27.23 | 16.86 |
| Zm00001d007820_P002 | Maize | plastid | 29.58 | 15.71 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 28.17 | 15.67 |
| Zm00001d034444_P002 | Maize | plastid | 29.58 | 15.56 |
Protein Annotations
| EnsemblPlants:Zm00001d042631_P001 | EnsemblPlants:Zm00001d042631_T001 | EnsemblPlantsGene:Zm00001d042631 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF14 |
| PFAM:PF04720 | ProteinID:ONM35911.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0002220B1E | UniProt:A0A1D6N5L1 |
| MapMan:35.2 | : | : | : | : | : |
Description
DUF506 family protein
Coordinates
chr3:-:174609009..174610682
Molecular Weight (calculated)
22641.0 Da
IEP (calculated)
10.964
GRAVY (calculated)
-0.277
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHLREIGEE RRTRSLLKRR LMMRLRKDGY DASLCRSSWV ATAEHPGGDY EYIDVVVAGE HGGGAASSSS TSSSSSRIVV DIDFSSQFQL ARPAPWYAQL
101: WARLPPVFVG PRARLRKAVS LLCEAAQRSL RESGLHVPPW RRSGYMQAKW LPGGTSEVVA AAAQRSVAIA RGAGGGTRRP GAGAGAGGLS MALLSSSGAE
201: ANGCQGQAGS MWA
101: WARLPPVFVG PRARLRKAVS LLCEAAQRSL RESGLHVPPW RRSGYMQAKW LPGGTSEVVA AAAQRSVAIA RGAGGGTRRP GAGAGAGGLS MALLSSSGAE
201: ANGCQGQAGS MWA
001: MGFSRAKRVT DPLAEEVRAR LVGCSFSSGS EHTGDGIEDY EDDDSPCLSD LVQGFLEDEV DTVDDESCWC DQDSGSDSDS DSELGELPDF ADDIAKLLRN
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
Arabidopsis Description
F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.