Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G77160.1 | Thale cress | cytosol | 89.23 | 88.21 |
| CDX88346 | Canola | nucleus | 70.77 | 71.6 |
| CDX87538 | Canola | nucleus | 69.62 | 70.43 |
| Bra015689.1-P | Field mustard | nucleus | 69.62 | 70.43 |
| Bra015691.1-P | Field mustard | cytosol | 70.0 | 69.2 |
| CDX87540 | Canola | cytosol | 69.62 | 68.82 |
| CDX88344 | Canola | cytosol | 70.0 | 68.68 |
| CDX87539 | Canola | nucleus | 70.0 | 67.91 |
| Bra015690.1-P | Field mustard | nucleus | 70.0 | 67.91 |
| CDX88345 | Canola | nucleus | 69.23 | 67.16 |
| PGSC0003DMT400079089 | Potato | cytosol | 23.08 | 39.47 |
| Solyc06g054640.1.1 | Tomato | cytosol | 29.23 | 34.23 |
| GSMUA_Achr7P03040_001 | Banana | nucleus | 28.46 | 28.57 |
| VIT_18s0001g15610.t01 | Wine grape | cytosol | 30.0 | 28.26 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 25.77 | 27.24 |
| HORVU3Hr1G091440.2 | Barley | cytosol | 25.38 | 27.16 |
| TraesCS3B01G442800.1 | Wheat | cytosol | 25.0 | 27.08 |
| TraesCS3A01G409700.1 | Wheat | cytosol | 25.0 | 26.86 |
| Zm00001d042631_P001 | Maize | cytosol | 21.92 | 26.76 |
| VIT_04s0044g00970.t01 | Wine grape | cytosol | 27.69 | 26.57 |
| KRH59552 | Soybean | cytosol | 27.31 | 26.1 |
| KRH43403 | Soybean | cytosol | 26.54 | 26.04 |
| OQU87982 | Sorghum | cytosol | 26.54 | 24.56 |
| AT3G54550.1 | Thale cress | plastid | 25.0 | 22.57 |
| AT3G25240.1 | Thale cress | cytosol | 24.23 | 22.42 |
| AT4G14620.1 | Thale cress | cytosol | 29.23 | 22.29 |
| Os01t0879600-00 | Rice | plastid | 25.77 | 22.19 |
| AT2G38820.2 | Thale cress | cytosol | 26.15 | 21.94 |
| AT3G07350.1 | Thale cress | nucleus | 24.62 | 21.48 |
| AT1G62420.1 | Thale cress | cytosol | 23.08 | 21.2 |
| AT1G12030.1 | Thale cress | mitochondrion | 23.46 | 20.68 |
| AT4G32480.1 | Thale cress | nucleus | 21.92 | 19.86 |
| AT2G39650.1 | Thale cress | cytosol | 21.92 | 19.59 |
| AT3G22970.1 | Thale cress | plastid | 27.69 | 19.46 |
| AT2G20670.1 | Thale cress | nucleus | 20.0 | 17.69 |
Protein Annotations
| MapMan:35.2 | EntrezGene:844051 | ProteinID:AAC34352.1 | ProteinID:AEE35941.1 | ArrayExpress:AT1G77145 | EnsemblPlantsGene:AT1G77145 |
| RefSeq:AT1G77145 | TAIR:AT1G77145 | RefSeq:AT1G77145-TAIR-G | EnsemblPlants:AT1G77145.1 | TAIR:AT1G77145.1 | EMBL:AY072091 |
| EMBL:AY096573 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_683503.1 | UniProt:O80651 | InterPro:PDDEXK-like | PFAM:PF04720 | PO:PO:0000293 |
| PANTHER:PTHR31579 | PANTHER:PTHR31579:SF14 | TIGRFAMs:TIGR01615 | UniParc:UPI00000A8C22 | SEG:seg | : |
Description
T14N5.3 protein [Source:UniProtKB/TrEMBL;Acc:O80651]
Coordinates
chr1:-:28989849..28991454
Molecular Weight (calculated)
29925.8 Da
IEP (calculated)
8.964
GRAVY (calculated)
-0.675
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGEEDLE KLVLDYIESP ITVSQHIESS TTALITLKEI LRAKGEKEKE MEEKIWSFIN GGRLSYEGDD EKRDVMNKIV SKLRSEGYDA SLSKTSWDSS
101: FDHREGCRVF RCSRKYEYID VMVKGDSNRD GVSKLKRVII DLDFKTQFEL ARQTEAYKDM TEMLPLVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW
201: RTTRYMQSKW LPENRRRVSG CKKGSWSWSV FDDGSEGRGE ARTWTVSGSG PKTKCCFPIF
101: FDHREGCRVF RCSRKYEYID VMVKGDSNRD GVSKLKRVII DLDFKTQFEL ARQTEAYKDM TEMLPLVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW
201: RTTRYMQSKW LPENRRRVSG CKKGSWSWSV FDDGSEGRGE ARTWTVSGSG PKTKCCFPIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.