Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35924 | Canola | nucleus | 84.23 | 83.67 |
| CDY60822 | Canola | nucleus | 82.55 | 82.27 |
| Bra040373.1-P | Field mustard | plastid | 52.68 | 81.77 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 82.21 | 81.67 |
| Bra029641.1-P | Field mustard | nucleus | 81.88 | 81.33 |
| CDY34904 | Canola | nucleus | 81.54 | 80.46 |
| VIT_00s0337g00040.t01 | Wine grape | cytosol | 47.32 | 50.0 |
| Solyc06g007580.1.1 | Tomato | nucleus | 46.98 | 46.82 |
| AT3G25240.1 | Thale cress | cytosol | 43.62 | 46.26 |
| PGSC0003DMT400051812 | Potato | nucleus | 45.97 | 46.13 |
| PGSC0003DMT400053173 | Potato | nucleus | 45.97 | 45.82 |
| Solyc06g083160.1.1 | Tomato | nucleus | 44.97 | 45.73 |
| KRH07392 | Soybean | nucleus | 44.3 | 44.15 |
| KRH46613 | Soybean | mitochondrion, nucleus | 39.93 | 41.75 |
| PGSC0003DMT400008686 | Potato | cytosol | 37.25 | 40.51 |
| GSMUA_Achr6P21070_001 | Banana | cytosol | 34.56 | 34.56 |
| Os01t0915000-01 | Rice | cytosol | 33.89 | 34.47 |
| TraesCS3B01G456400.1 | Wheat | cytosol | 32.89 | 34.03 |
| Os11t0437600-01 | Rice | plastid | 34.9 | 33.99 |
| Zm00001d042376_P001 | Maize | cytosol | 33.22 | 33.67 |
| TraesCS3D01G416400.1 | Wheat | cytosol | 32.89 | 33.56 |
| TraesCS3A01G420900.1 | Wheat | cytosol | 32.55 | 33.45 |
| EES04096 | Sorghum | cytosol | 33.22 | 33.45 |
| HORVU4Hr1G054810.1 | Barley | mitochondrion | 32.55 | 33.11 |
| Zm00001d012069_P001 | Maize | mitochondrion | 31.88 | 32.99 |
| TraesCS4D01G188800.1 | Wheat | mitochondrion | 32.89 | 32.78 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 22.82 | 32.69 |
| TraesCS4B01G187500.1 | Wheat | mitochondrion | 31.88 | 31.77 |
| Solyc09g057760.2.1 | Tomato | nucleus | 22.48 | 31.02 |
| TraesCS4A01G116900.1 | Wheat | plastid | 32.89 | 30.06 |
| AT3G54550.1 | Thale cress | plastid | 26.85 | 27.78 |
| AT1G12030.1 | Thale cress | mitochondrion | 26.17 | 26.44 |
| AT2G38820.2 | Thale cress | cytosol | 27.18 | 26.13 |
| AT2G39650.1 | Thale cress | cytosol | 25.5 | 26.12 |
| AT1G62420.1 | Thale cress | cytosol | 24.16 | 25.44 |
| HORVU3Hr1G093260.1 | Barley | plastid | 33.89 | 24.94 |
| AT1G77145.1 | Thale cress | cytosol | 21.48 | 24.62 |
| AT3G22970.1 | Thale cress | plastid | 29.53 | 23.78 |
| AT4G14620.1 | Thale cress | cytosol | 27.18 | 23.75 |
| AT1G77160.1 | Thale cress | cytosol | 20.47 | 23.19 |
| AT4G32480.1 | Thale cress | nucleus | 20.47 | 21.25 |
| AT2G20670.1 | Thale cress | nucleus | 19.8 | 20.07 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819923 | UniProt:A0A178VE91 | ProteinID:AAF02145.1 | ProteinID:AEE74531.1 | ArrayExpress:AT3G07350 |
| EnsemblPlantsGene:AT3G07350 | RefSeq:AT3G07350 | TAIR:AT3G07350 | RefSeq:AT3G07350-TAIR-G | EnsemblPlants:AT3G07350.1 | TAIR:AT3G07350.1 |
| EMBL:AY045938 | EMBL:AY113868 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| RefSeq:NP_566303.1 | ProteinID:OAP03675.1 | InterPro:PDDEXK-like | PFAM:PF04720 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF4 | UniProt:Q9SRT1 | TIGRFAMs:TIGR01615 |
| UniParc:UPI000009E174 | SEG:seg | : | : | : | : |
Description
F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1]
Coordinates
chr3:+:2347186..2348791
Molecular Weight (calculated)
33120.0 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.397
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSRAKRVT DPLAEEVRAR LVGCSFSSGS EHTGDGIEDY EDDDSPCLSD LVQGFLEDEV DTVDDESCWC DQDSGSDSDS DSELGELPDF ADDIAKLLRN
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.