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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35924 Canola nucleus 94.67 94.67
Bra040373.1-P Field mustard plastid 53.67 83.85
AT3G07350.1 Thale cress nucleus 81.33 81.88
VIT_00s0337g00040.t01 Wine grape cytosol 46.67 49.65
Bra013223.1-P Field mustard nucleus 45.33 48.23
Solyc06g007580.1.1 Tomato nucleus 48.0 48.16
PGSC0003DMT400051812 Potato nucleus 47.33 47.81
PGSC0003DMT400053173 Potato nucleus 47.0 47.16
Solyc06g083160.1.1 Tomato nucleus 45.67 46.76
KRH07392 Soybean nucleus 43.67 43.81
PGSC0003DMT400008686 Potato cytosol 39.33 43.07
KRH46613 Soybean mitochondrion, nucleus 40.0 42.11
GSMUA_Achr6P21070_001 Banana cytosol 34.67 34.9
Os01t0915000-01 Rice cytosol 34.0 34.81
TraesCS4D01G188800.1 Wheat mitochondrion 34.33 34.45
Os11t0437600-01 Rice plastid 34.67 33.99
Solyc09g057760.2.1 Tomato nucleus 24.33 33.8
HORVU4Hr1G054810.1 Barley mitochondrion 33.0 33.79
Zm00001d042376_P001 Maize cytosol 32.33 32.99
EES04096 Sorghum cytosol 32.33 32.77
TraesCS3B01G456400.1 Wheat cytosol 31.33 32.64
TraesCS4B01G187500.1 Wheat mitochondrion 32.33 32.44
TraesCS3A01G420900.1 Wheat cytosol 31.33 32.41
TraesCS3D01G416400.1 Wheat cytosol 31.33 32.19
Zm00001d012069_P001 Maize mitochondrion 30.33 31.6
TraesCS4A01G116900.1 Wheat plastid 33.67 30.98
GSMUA_Achr11P... Banana cytosol, mitochondrion 21.33 30.77
Bra016797.1-P Field mustard cytosol 27.0 27.46
Bra019736.1-P Field mustard mitochondrion 26.0 26.62
Bra001897.1-P Field mustard cytosol 28.0 25.23
Bra017099.1-P Field mustard cytosol 25.0 25.0
Bra000140.1-P Field mustard cytosol 25.0 24.83
Bra036877.1-P Field mustard cytosol, plastid 28.67 24.29
HORVU3Hr1G093260.1 Barley plastid 32.67 24.2
Bra033896.1-P Field mustard cytosol 29.33 23.98
Bra000098.1-P Field mustard cytosol 23.67 22.98
Bra015689.1-P Field mustard nucleus 19.67 22.96
Bra015691.1-P Field mustard cytosol 20.0 22.81
Bra015690.1-P Field mustard nucleus 19.67 22.01
Bra031136.1-P Field mustard nucleus 19.67 20.07
Bra036492.1-P Field mustard nucleus 19.33 19.53
Bra024209.1-P Field mustard nucleus 19.0 19.32
Bra026262.1-P Field mustard nucleus 18.33 18.39
Protein Annotations
EnsemblPlants:Bra029641.1EnsemblPlants:Bra029641.1-PEnsemblPlantsGene:Bra029641InterPro:PDDEXK-likePANTHER:PTHR31579PANTHER:PTHR31579:SF4
PFAM:PF04720SEG:segTIGRFAMs:TIGR01615UniParc:UPI0002547FACUniProt:M4ELH3MapMan:35.2
Description
AT3G07350 (E=5e-123) | unknown protein
Coordinates
chrA05:-:22850133..22851035
Molecular Weight (calculated)
33560.6 Da
IEP (calculated)
7.009
GRAVY (calculated)
-0.426
Length
300 amino acids
Sequence
(BLAST)
001: MGFSRAKRVT DPLADEAKAR LVGCSFSSGS EHTGDGIDDY DDDSPCLSYL VQGFLEDEAN QDGDKEPRWC ESDSESDSDS DSERVELPDF AEDIVKILRN
101: SLSEDNYGRM VLFHVARAME MLPPLGSDQE QRAVLRRKVM SFLRGFGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPAAA TSHQTVRYIV DLDFASRFQI
201: ARPTAQYSRV LQSLPAVFVG RGDDLKQILR LVCEAARLSL RSRGLTLPPW RKNRYMQTRW LGSYKRTVNL TPSSAAVNTV MCRAVGFDNA VGDRLFVRTR
Best Arabidopsis Sequence Match ( AT3G07350.1 )
(BLAST)
001: MGFSRAKRVT DPLAEEVRAR LVGCSFSSGS EHTGDGIEDY EDDDSPCLSD LVQGFLEDEV DTVDDESCWC DQDSGSDSDS DSELGELPDF ADDIAKLLRN
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR
Arabidopsis Description
F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.