Factsheet for Bra015691.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77145.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G77145.1	Bra000214.1-P	AT2G41100.1	17360592
AT1G77145.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G77145.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G77145.1	Bra039723.1-P	AT4G14640.1	17360592
AT1G77145.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G77145.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87540	Canola	cytosol	96.96	96.96
Bra015690.1-P	Field mustard	nucleus	81.37	79.85
AT1G77145.1	Thale cress	cytosol	69.2	70.0
Bra015689.1-P	Field mustard	nucleus	66.54	68.09
AT1G77160.1	Thale cress	cytosol	66.16	66.16
PGSC0003DMT400079089	Potato	cytosol	21.29	36.84
Solyc06g054640.1.1	Tomato	cytosol	26.62	31.53
Bra040373.1-P	Field mustard	plastid	22.81	31.25
KRH59552	Soybean	cytosol	28.9	27.94
GSMUA_Achr7P03040_001	Banana	nucleus	27.38	27.8
VIT_18s0001g15610.t01	Wine grape	cytosol	28.9	27.54
KRH43403	Soybean	cytosol	27.38	27.17
VIT_04s0044g00970.t01	Wine grape	cytosol	27.0	26.2
HORVU3Hr1G091440.2	Barley	cytosol	23.57	25.51
TraesCS3B01G442800.1	Wheat	cytosol	23.19	25.42
TraesCS3A01G409700.1	Wheat	cytosol	23.19	25.21
TraesCS3D01G404300.1	Wheat	nucleus	23.57	25.2
Zm00001d042631_P001	Maize	cytosol	19.77	24.41
OQU87982	Sorghum	cytosol	25.1	23.49
Os01t0879600-00	Rice	plastid	24.33	21.19
Bra016797.1-P	Field mustard	cytosol	22.81	20.34
Bra013223.1-P	Field mustard	nucleus	21.67	20.21
Bra001897.1-P	Field mustard	cytosol	25.48	20.12
Bra029641.1-P	Field mustard	nucleus	22.81	20.0
Bra017099.1-P	Field mustard	cytosol	22.81	20.0
Bra019736.1-P	Field mustard	mitochondrion	21.67	19.45
Bra036877.1-P	Field mustard	cytosol, plastid	25.86	19.21
Bra000098.1-P	Field mustard	cytosol	22.43	19.09
Bra036492.1-P	Field mustard	nucleus	20.15	17.85
Bra033896.1-P	Field mustard	cytosol	24.71	17.71
Bra031136.1-P	Field mustard	nucleus	19.77	17.69
Bra000140.1-P	Field mustard	cytosol	20.15	17.55
Bra026262.1-P	Field mustard	nucleus	18.63	16.39
Bra024209.1-P	Field mustard	nucleus	17.87	15.93

Protein Annotations

EnsemblPlants:Bra015691.1	EnsemblPlants:Bra015691.1-P	EnsemblPlantsGene:Bra015691	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF14
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0002541A94	UniProt:M4DGR6	MapMan:35.2

Description

AT1G77145 (E=2e-076) | unknown protein

Coordinates

chrA07:-:21336474..21337545

Molecular Weight (calculated)

30142.3 Da

IEP (calculated)

8.998

GRAVY (calculated)

-0.634

Length

263 amino acids

Sequence
(BLAST)

001: MGSLGKEDLD KLVLDYIEPP VTVQPVTVPP ATVPNHMEKS STALVTLQEI LRTKGEKEKE MEEKVNSFII RRLSYEGDDE KRDVMKKIVS KLRSDGYNDV
101: SIYRTSWDSS FDRREGCSRM FKCKRKYEYI EVMVATGRGG DDRSKMKRLI IDLDFKSQFE LAKQTEVYKD VTQMLPTVFV ATEERLKRVV SLVSGEMTES
201: MKKEGMSRPP WRTTRYMLAK WLPEKRVSSS KKGSWSMFDD DGGEAVETTS GIGFKTTCGF QLS

Best Arabidopsis Sequence Match ( AT1G77145.1 )
(BLAST)

001: MGSLGEEDLE KLVLDYIESP ITVSQHIESS TTALITLKEI LRAKGEKEKE MEEKIWSFIN GGRLSYEGDD EKRDVMNKIV SKLRSEGYDA SLSKTSWDSS
101: FDHREGCRVF RCSRKYEYID VMVKGDSNRD GVSKLKRVII DLDFKTQFEL ARQTEAYKDM TEMLPLVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW
201: RTTRYMQSKW LPENRRRVSG CKKGSWSWSV FDDGSEGRGE ARTWTVSGSG PKTKCCFPIF

Arabidopsis Description

T14N5.3 protein [Source:UniProtKB/TrEMBL;Acc:O80651]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.