Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G77145.1 | Thale cress | cytosol | 88.21 | 89.23 |
| CDX88346 | Canola | nucleus | 66.54 | 68.09 |
| CDX87538 | Canola | nucleus | 66.16 | 67.7 |
| Bra015689.1-P | Field mustard | nucleus | 66.16 | 67.7 |
| CDX87540 | Canola | cytosol | 66.16 | 66.16 |
| Bra015691.1-P | Field mustard | cytosol | 66.16 | 66.16 |
| CDX88344 | Canola | cytosol | 66.16 | 65.66 |
| CDX87539 | Canola | nucleus | 65.78 | 64.55 |
| Bra015690.1-P | Field mustard | nucleus | 65.78 | 64.55 |
| CDX88345 | Canola | nucleus | 65.4 | 64.18 |
| PGSC0003DMT400079089 | Potato | cytosol | 22.43 | 38.82 |
| Solyc06g054640.1.1 | Tomato | cytosol | 27.76 | 32.88 |
| GSMUA_Achr7P03040_001 | Banana | nucleus | 27.76 | 28.19 |
| VIT_18s0001g15610.t01 | Wine grape | cytosol | 29.28 | 27.9 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 25.1 | 26.83 |
| HORVU3Hr1G091440.2 | Barley | cytosol | 24.71 | 26.75 |
| TraesCS3B01G442800.1 | Wheat | cytosol | 24.33 | 26.67 |
| KRH59552 | Soybean | cytosol | 27.38 | 26.47 |
| TraesCS3A01G409700.1 | Wheat | cytosol | 24.33 | 26.45 |
| Zm00001d042631_P001 | Maize | cytosol | 21.29 | 26.29 |
| VIT_04s0044g00970.t01 | Wine grape | cytosol | 27.0 | 26.2 |
| KRH43403 | Soybean | cytosol | 26.24 | 26.04 |
| OQU87982 | Sorghum | cytosol | 25.86 | 24.2 |
| AT3G25240.1 | Thale cress | cytosol | 22.81 | 21.35 |
| AT3G54550.1 | Thale cress | plastid | 22.81 | 20.83 |
| Os01t0879600-00 | Rice | plastid | 23.57 | 20.53 |
| AT3G07350.1 | Thale cress | nucleus | 23.19 | 20.47 |
| AT4G14620.1 | Thale cress | cytosol | 25.86 | 19.94 |
| AT1G62420.1 | Thale cress | cytosol | 21.29 | 19.79 |
| AT2G38820.2 | Thale cress | cytosol | 23.19 | 19.68 |
| AT4G32480.1 | Thale cress | nucleus | 21.29 | 19.51 |
| AT1G12030.1 | Thale cress | mitochondrion | 21.67 | 19.32 |
| AT2G39650.1 | Thale cress | cytosol | 20.15 | 18.21 |
| AT3G22970.1 | Thale cress | plastid | 25.48 | 18.11 |
| AT2G20670.1 | Thale cress | nucleus | 19.77 | 17.69 |
Protein Annotations
| ArrayExpress:AT1G77160 | EMBL:DQ132683 | EnsemblPlants:AT1G77160.1 | EnsemblPlantsGene:AT1G77160 | EntrezGene:844053 | InterPro:PDDEXK-like |
| PANTHER:PTHR31579 | PANTHER:PTHR31579:SF14 | PFAM:PF04720 | ProteinID:AEE35943.1 | ProteinID:ANM58974.1 | RefSeq:AT1G77160 |
| RefSeq:AT1G77160-TAIR-G | RefSeq:NP_001321373.1 | RefSeq:NP_177841.2 | SEG:seg | TAIR:AT1G77160 | TAIR:AT1G77160.1 |
| TIGRFAMs:TIGR01615 | Unigene:At.52545 | UniParc:UPI000058DF15 | UniProt:Q45GL9 | MapMan:35.2 | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q45GL9]
Coordinates
chr1:-:28995146..28996594
Molecular Weight (calculated)
30210.1 Da
IEP (calculated)
8.257
GRAVY (calculated)
-0.612
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGEEDFE KLVLGYIESP MTVSQHINTS SKALITLQEI FLQEILRAKG VEEKEMEEKI RSYINRGRLS YEGDDEKRDV MNKIVSKLRS EGYNASLSKT
101: SWDSSFDHRE GCRVFTCSRK YEYIDAMVIG DSDRDGVSKL KRVIIDLDFK TQFELARQTE AYKDMTEMLP TVFVATEGRL RRVVSLVCGE MKKSMKKEGM
201: SRPPWRTSRY MQSKWLPENC RRDAGCKKGS WSWSVFDDGG EGIGEARSWT VSGPKTKCCF PIF
101: SWDSSFDHRE GCRVFTCSRK YEYIDAMVIG DSDRDGVSKL KRVIIDLDFK TQFELARQTE AYKDMTEMLP TVFVATEGRL RRVVSLVCGE MKKSMKKEGM
201: SRPPWRTSRY MQSKWLPENC RRDAGCKKGS WSWSVFDDGG EGIGEARSWT VSGPKTKCCF PIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.