Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001897.1-P | Field mustard | cytosol | 72.97 | 81.08 |
| CDX92970 | Canola | cytosol | 72.7 | 80.78 |
| CDX94877 | Canola | cytosol | 75.14 | 80.12 |
| Bra033896.1-P | Field mustard | cytosol | 77.3 | 77.93 |
| CDY10330 | Canola | cytosol | 75.68 | 76.5 |
| CDY10329 | Canola | plastid | 70.81 | 69.31 |
| AT4G14620.1 | Thale cress | cytosol | 61.35 | 66.57 |
| KRH34359 | Soybean | plastid | 61.89 | 59.17 |
| VIT_05s0020g04500.t01 | Wine grape | nucleus | 60.81 | 58.29 |
| KRG92439 | Soybean | plastid | 61.35 | 57.76 |
| PGSC0003DMT400041951 | Potato | cytosol | 54.32 | 54.32 |
| KRH69065 | Soybean | cytosol | 52.97 | 53.55 |
| Solyc09g082980.2.1 | Tomato | nucleus | 57.3 | 53.27 |
| PGSC0003DMT400015576 | Potato | cytosol, plastid | 56.49 | 52.78 |
| KRH31637 | Soybean | cytosol | 54.32 | 52.48 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 53.78 | 51.16 |
| AT2G38820.2 | Thale cress | cytosol | 42.7 | 50.97 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 45.41 | 49.85 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 45.68 | 47.08 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 44.32 | 46.46 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 45.68 | 45.92 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 31.89 | 44.7 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 43.78 | 44.63 |
| AT3G54550.1 | Thale cress | plastid | 34.05 | 43.75 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 44.32 | 42.93 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 32.97 | 40.67 |
| EER91615 | Sorghum | mitochondrion | 32.16 | 40.61 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 43.78 | 39.8 |
| Os10t0417800-01 | Rice | plastid | 31.89 | 39.2 |
| EER95459 | Sorghum | plastid | 31.08 | 38.46 |
| Os03t0162500-01 | Rice | plastid | 31.62 | 38.11 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 31.35 | 37.3 |
| TraesCS5A01G439200.1 | Wheat | plastid | 37.57 | 37.07 |
| TraesCS5B01G442200.1 | Wheat | plastid | 37.57 | 37.07 |
| Zm00001d027763_P001 | Maize | plastid | 30.0 | 37.0 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 31.08 | 36.98 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 31.35 | 36.83 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 31.08 | 36.51 |
| TraesCS5D01G446400.1 | Wheat | plastid | 37.03 | 35.96 |
| EER93295 | Sorghum | plastid | 37.84 | 35.62 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 36.22 | 34.99 |
| Zm00001d034444_P002 | Maize | plastid | 37.84 | 34.57 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 37.84 | 34.57 |
| HORVU5Hr1G105950.2 | Barley | plastid | 37.03 | 33.66 |
| Zm00001d007820_P002 | Maize | plastid | 35.41 | 32.67 |
| AT3G07350.1 | Thale cress | nucleus | 23.78 | 29.53 |
| EER98072 | Sorghum | cytosol, plastid | 35.95 | 28.06 |
| AT1G77145.1 | Thale cress | cytosol | 19.46 | 27.69 |
| AT3G25240.1 | Thale cress | cytosol | 20.81 | 27.4 |
| AT1G77160.1 | Thale cress | cytosol | 18.11 | 25.48 |
| AT2G39650.1 | Thale cress | cytosol | 19.73 | 25.09 |
| AT1G62420.1 | Thale cress | cytosol | 18.11 | 23.67 |
| AT1G12030.1 | Thale cress | mitochondrion | 17.84 | 22.37 |
| AT2G20670.1 | Thale cress | nucleus | 16.76 | 21.09 |
| AT4G32480.1 | Thale cress | nucleus | 16.22 | 20.91 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821871 | ProteinID:AEE76700.1 | ArrayExpress:AT3G22970 | EnsemblPlantsGene:AT3G22970 | RefSeq:AT3G22970 |
| TAIR:AT3G22970 | RefSeq:AT3G22970-TAIR-G | EnsemblPlants:AT3G22970.1 | TAIR:AT3G22970.1 | Unigene:At.43562 | ProteinID:BAB03045.1 |
| EMBL:BT024897 | RefSeq:NP_188937.1 | InterPro:PDDEXK-like | PFAM:PF04720 | PO:PO:0000293 | PANTHER:PTHR31579 |
| PANTHER:PTHR31579:SF19 | UniProt:Q9LIJ8 | TIGRFAMs:TIGR01615 | UniParc:UPI00000A9736 | SEG:seg | : |
Description
At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
Coordinates
chr3:+:8152038..8154149
Molecular Weight (calculated)
40904.5 Da
IEP (calculated)
5.018
GRAVY (calculated)
-0.344
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.