Factsheet for GSMUA_Achr9P25590_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P24940_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22970.1	GSMUA_Achr10P...	AT4G15560.1	24104567
AT3G22970.1	GSMUA_Achr3P24940_001	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P20590_001	Banana	plastid	66.09	74.1
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	69.53	74.08
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	58.97	66.85
GSMUA_Achr3P15230_001	Banana	cytosol	45.45	54.9
GSMUA_Achr4P14880_001	Banana	mitochondrion	35.38	54.55
GSMUA_Achr8P26930_001	Banana	cytosol	45.21	52.12
Os03t0162500-01	Rice	plastid	38.57	51.14
GSMUA_Achr8P04470_001	Banana	cytosol	45.45	50.27
KRH71351	Soybean	cytosol	44.23	50.14
TraesCS5B01G442200.1	Wheat	plastid	46.19	50.13
KRH32089	Soybean	cytosol	41.52	49.85
EER95459	Sorghum	plastid	36.61	49.83
Zm00001d027763_P001	Maize	plastid	36.61	49.67
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	38.33	49.52
Zm00001d032955_P001	Maize	cytosol, mitochondrion, nucleus, plastid	36.36	49.33
TraesCS5A01G439200.1	Wheat	plastid	45.45	49.33
Os10t0417800-01	Rice	plastid	36.12	48.84
TraesCS5D01G446400.1	Wheat	plastid	45.7	48.82
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	37.59	48.57
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	37.1	48.55
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	37.1	48.55
EER91615	Sorghum	mitochondrion	34.64	48.12
AT2G38820.2	Thale cress	cytosol	36.61	48.06
Bra001897.1-P	Field mustard	cytosol	38.82	47.45
CDX92970	Canola	cytosol	38.82	47.45
CDY18366	Canola	cytosol	34.89	47.33
VIT_05s0020g04500.t01	Wine grape	nucleus	44.72	47.15
CDY07696	Canola	cytosol	36.12	47.12
CDX93300	Canola	cytosol	34.64	47.0
Bra017099.1-P	Field mustard	cytosol	34.64	47.0
Bra000098.1-P	Field mustard	cytosol	35.63	46.93
Zm00001d018962_P001	Maize	mitochondrion, plastid	43.49	46.21
Os03t0796600-01	Rice	cytosol, nucleus, plastid	45.95	46.17
KRG95606	Soybean	cytosol	40.79	45.98
CDY14428	Canola	cytosol	35.14	45.98
VIT_00s0179g00360.t01	Wine grape	cytosol	44.72	45.84
CDY29750	Canola	nucleus, plastid	39.8	45.76
Bra036877.1-P	Field mustard	cytosol, plastid	39.56	45.48
CDY16266	Canola	nucleus	39.8	45.38
CDX94877	Canola	cytosol	38.33	44.96
PGSC0003DMT400041951	Potato	cytosol	40.79	44.86
EER93295	Sorghum	plastid	43.0	44.53
HORVU5Hr1G105950.2	Barley	plastid	44.23	44.23
KRH34359	Soybean	plastid	42.01	44.19
Bra033896.1-P	Field mustard	cytosol	39.8	44.14
AT3G54550.1	Thale cress	plastid	31.2	44.1
AT3G22970.1	Thale cress	plastid	39.8	43.78
KRG92439	Soybean	plastid	42.01	43.51
PGSC0003DMT400015576	Potato	cytosol, plastid	42.01	43.18
Zm00001d034444_P002	Maize	plastid	42.51	42.72
CDY10330	Canola	cytosol	38.33	42.62
AT4G14620.1	Thale cress	cytosol	35.63	42.52
Solyc09g082980.2.1	Tomato	nucleus	41.28	42.21
Zm00001d007820_P002	Maize	plastid	41.52	42.14
KRH31637	Soybean	cytosol	39.07	41.51
KRH69065	Soybean	cytosol	37.1	41.26
Solyc06g053910.2.1	Tomato	cytosol, plastid	39.31	41.13
CDY10329	Canola	plastid	37.1	39.95
Solyc09g065760.2.1	Tomato	cytosol, plastid	39.07	36.55
PGSC0003DMT400049773	Potato	nucleus	38.82	36.41
EER98072	Sorghum	cytosol, plastid	41.52	35.65
GSMUA_Achr6P21070_001	Banana	cytosol	23.59	32.21
GSMUA_Achr7P03040_001	Banana	nucleus	19.16	30.12
GSMUA_Achr3P03980_001	Banana	cytosol	20.15	28.57
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	13.51	26.44
GSMUA_Achr7P24960_001	Banana	cytosol	17.44	25.91
GSMUA_Achr3P31780_001	Banana	cytosol	17.94	25.44
GSMUA_Achr10P...	Banana	mitochondrion	21.62	25.29
GSMUA_Achr4P02600_001	Banana	nucleus	16.71	24.46
GSMUA_Achr5P07100_001	Banana	cytosol	22.6	17.8

Protein Annotations

EnsemblPlants:GSMUA_Achr9P25590_001	EnsemblPlants:GSMUA_Achr9T25590_001	EnsemblPlantsGene:GSMUA_Achr9G25590_001	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000296B70C	UniProt:M0U3G6	MapMan:35.2

Description

Putative plant-specific domain TIGR01615 family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G25590_001]

Coordinates

chr9:-:30123842..30125641

Molecular Weight (calculated)

44262.0 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.514

Length

407 amino acids

Sequence
(BLAST)

001: MPFQMKVRPI DSEGAIAFAP RSDPWKAAAK SRLKRLLERQ FPSVLRPSLA EKLAGSGDWK EKEREEDGGD VEPSSVCLDT MVLSFIENGN HEKPPRGRCN
101: CFNASFDDSS DDGFDARDGD FLGSSSPTGD AAESIEGLVP CASVAERNLL ADASKILEKA RNSKNKDVCR RMVVDGLRSL GYDAAICKSR WDKSPSFPAG
201: EYEYIDVVVD GGDRLLVDVD FKSEFEVARP SKSYRAVLHH LPSVFVGRPE RLQSIVALAS EAGRQSLKKK GLHVPPWRQP EYTRAKWLSP YQRTTAMEAK
301: EESASGGVKG GRGSGIIPCS ISAVNFSGEF EESGVGKLGD DSPVATAEAK EKTEVAASPW RPSPARPTAA GVKAITGLAL DFVRVDKKRN SASVEYCNYM
401: ESGHPNI

Best Arabidopsis Sequence Match ( AT2G38820.2 )
(BLAST)

001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV

Arabidopsis Description

Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.