Factsheet for GSMUA_Achr3P03980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
peroxisome 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07354	Sorghum	cytosol	42.16	39.16
Zm00001d051691_P001	Maize	cytosol	40.42	36.94
TraesCS6A01G283100.1	Wheat	cytosol	39.37	36.33
TraesCS6D01G263600.1	Wheat	cytosol	39.72	35.62
Os02t0720400-00	Rice	nucleus	40.42	35.05
KRH37828	Soybean	cytosol	16.03	30.46
VIT_12s0059g01640.t01	Wine grape	nucleus	31.01	29.57
CDY31234	Canola	cytosol	29.97	29.25
Bra016797.1-P	Field mustard	cytosol	29.97	29.15
CDY21027	Canola	cytosol	29.97	29.15
CDY53353	Canola	mitochondrion	29.62	29.01
Solyc11g012120.1.1	Tomato	cytosol	29.97	28.96
Bra019736.1-P	Field mustard	mitochondrion	29.27	28.67
KRH11519	Soybean	mitochondrion	31.01	28.53
CDY30048	Canola	mitochondrion	29.27	28.47
AT1G12030.1	Thale cress	mitochondrion	29.27	28.47
AT1G62420.1	Thale cress	cytosol	27.53	27.92
KRH51155	Soybean	cytosol	28.57	27.61
KRH36535	Soybean	endoplasmic reticulum, golgi	31.36	26.79
GSMUA_Achr4P14880_001	Banana	mitochondrion	22.65	24.62
GSMUA_Achr6P21070_001	Banana	cytosol	25.09	24.16
GSMUA_Achr7P03040_001	Banana	nucleus	20.91	23.17
GSMUA_Achr3P15230_001	Banana	cytosol	24.74	21.07
GSMUA_Achr8P26930_001	Banana	cytosol	25.78	20.96
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	26.13	20.89
GSMUA_Achr4P02600_001	Banana	nucleus	20.21	20.86
GSMUA_Achr8P20590_001	Banana	plastid	25.78	20.39
GSMUA_Achr8P04470_001	Banana	cytosol	26.13	20.38
GSMUA_Achr9P25590_001	Banana	plastid	28.57	20.15
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	26.13	19.63
GSMUA_Achr3P31780_001	Banana	cytosol	19.51	19.51
GSMUA_Achr7P24960_001	Banana	cytosol	18.12	18.98
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	11.85	16.35
GSMUA_Achr10P...	Banana	mitochondrion	19.51	16.09
GSMUA_Achr5P07100_001	Banana	cytosol	20.56	11.41

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03980_001	EnsemblPlants:GSMUA_Achr3T03980_001	EnsemblPlantsGene:GSMUA_Achr3G03980_001	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF15
PFAM:PF04720	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI000294CFBF	UniProt:M0SBL6	MapMan:35.2

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G03980_001]

Coordinates

chr3:+:2559628..2560953

Molecular Weight (calculated)

31783.6 Da

IEP (calculated)

7.852

GRAVY (calculated)

-0.450

Length

287 amino acids

Sequence
(BLAST)

001: MARKYKRATA PLDETARARL WQEVSSCVSV ESTTSDTAEL ADLIDSFYNE EEIDERKGKY GMGSEKGGYL TRRSLDSVLA ESEADMVGHR IRVAAERGVS
101: AVSPAGDGFK RRVIGWLRDK GFDAGLCKSS WERAERIQAG THEYIDVIDR GGGTRYILEI DLAAEFEIAR PTQDYTALLR ALPSVFVGRP GALESIVSLM
201: CVAMEESIRS SGMHLPPWRR KEYVRAKWFS SFGRNSAAGG EADRGAASRS GTATTKPCRI ELRCREVKVR EGMLAEEFRG TLNGYGF

Best Arabidopsis Sequence Match ( AT1G62420.1 )
(BLAST)

001: MVEIQGRFKR IESAFNVAAA RVHPPCDNSS GSDHSPDLSD LVASFIEKEG QIVLREEEET SSDDNNLEDV NERLRKLLEG LSCGEERMRI LSATMEVAGT
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV

Arabidopsis Description

DUF506 family protein (DUF506) [Source:UniProtKB/TrEMBL;Acc:O48807]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.