Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G263600.1 | Wheat | cytosol | 92.6 | 90.0 |
| EES07354 | Sorghum | cytosol | 57.88 | 58.25 |
| Os02t0720400-00 | Rice | nucleus | 61.74 | 58.01 |
| Zm00001d051691_P001 | Maize | cytosol | 58.52 | 57.96 |
| GSMUA_Achr3P03980_001 | Banana | cytosol | 36.33 | 39.37 |
| Bra016797.1-P | Field mustard | cytosol | 28.3 | 29.83 |
| CDY21027 | Canola | cytosol | 28.3 | 29.83 |
| CDY31234 | Canola | cytosol | 27.97 | 29.59 |
| TraesCS3A01G420900.1 | Wheat | cytosol | 27.33 | 29.31 |
| KRH37828 | Soybean | cytosol | 14.15 | 29.14 |
| CDY53353 | Canola | mitochondrion | 27.33 | 29.01 |
| Bra019736.1-P | Field mustard | mitochondrion | 27.01 | 28.67 |
| VIT_12s0059g01640.t01 | Wine grape | nucleus | 27.65 | 28.57 |
| AT1G12030.1 | Thale cress | mitochondrion | 27.01 | 28.47 |
| CDY30048 | Canola | mitochondrion | 27.01 | 28.47 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 26.37 | 28.18 |
| AT1G62420.1 | Thale cress | cytosol | 24.44 | 26.86 |
| KRH11519 | Soybean | mitochondrion | 26.37 | 26.28 |
| Solyc11g012120.1.1 | Tomato | cytosol | 24.76 | 25.93 |
| KRH51155 | Soybean | cytosol | 24.76 | 25.93 |
| TraesCS3A01G409700.1 | Wheat | cytosol | 19.94 | 25.62 |
| TraesCS4A01G116900.1 | Wheat | plastid | 26.69 | 25.46 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 26.69 | 24.7 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 21.86 | 24.37 |
| TraesCS5A01G439200.1 | Wheat | plastid | 27.33 | 22.67 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 22.83 | 22.54 |
| TraesCS3A01G530700.1 | Wheat | plastid | 19.61 | 17.68 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G283100.1 | EnsemblPlantsGene:TraesCS6A01G283100 | InterPro:PDDEXK-like | ncoils:Coil | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF15 |
| PFAM:PF04720 | SEG:seg | TIGRFAMs:TIGR01615 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6A:+:514326327..514327378
Molecular Weight (calculated)
32390.2 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.130
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSPTSYKK ATAALDEAAR ARLRGPFFGG TTPSSASGQE DVDDDDGLVE LVHEFYNGYG EDAVAKEAVA PRPASATWVD ALQAALADAT ADAAAARIRA
101: EAERAVVGAG PNVAGGEAVR KLVAARLRAR GFDAGVCRSS WERGSSVPAG SHEYVDVVIA AGASTSRYIV EVNLAIEFET ARPSAEYQEL LLALPTVLVA
201: RPETFKEVAA AMCAAAAESI RGAGMHVPPW RRARYVQAKW SGKYKRAAAV AVAAAAPSGS PWEAVASSTA AAEARPRRGV PASGGPKHCG MEMGRREMAF
301: GSTRPLMFRG L
101: EAERAVVGAG PNVAGGEAVR KLVAARLRAR GFDAGVCRSS WERGSSVPAG SHEYVDVVIA AGASTSRYIV EVNLAIEFET ARPSAEYQEL LLALPTVLVA
201: RPETFKEVAA AMCAAAAESI RGAGMHVPPW RRARYVQAKW SGKYKRAAAV AVAAAAPSGS PWEAVASSTA AAEARPRRGV PASGGPKHCG MEMGRREMAF
301: GSTRPLMFRG L
001: MVEIQGRFKR IESAFNVAAA RVHPPCDNSS GSDHSPDLSD LVASFIEKEG QIVLREEEET SSDDNNLEDV NERLRKLLEG LSCGEERMRI LSATMEVAGT
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
101: FVGDISSSKR HLMAFLRNKG FDAGLCKSSW ERFGKNTGGK YEYVDVRCGG DYNNRYFVET NLAGEFEIAR PTKRYLSILS QVPRVFVGTS EELKLLVRIM
201: CHEMRRSMKH VGIHVPPWRR NGYMQAKWFG FYKRTSTTNN YEMVNTYDTT AFKGCKEEFW EAKGLKVMVG QLSIAFNISA VEV
Arabidopsis Description
DUF506 family protein (DUF506) [Source:UniProtKB/TrEMBL;Acc:O48807]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.