Factsheet for TraesCS3A01G530700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G536200.1	Wheat	plastid	97.39	97.11
TraesCS3B01G600900.1	Wheat	plastid	96.52	95.42
HORVU3Hr1G115940.1	Barley	plastid	93.91	76.6
Os01t0973600-01	Rice	plastid	71.88	73.59
Zm00001d041955_P001	Maize	plastid	70.43	70.64
VIT_13s0019g01100.t01	Wine grape	nucleus	43.77	55.51
KRH70457	Soybean	cytosol	47.54	53.25
GSMUA_Achr10P...	Banana	mitochondrion	53.33	52.87
KRH01670	Soybean	nucleus	46.67	52.27
AT2G39650.1	Thale cress	cytosol	42.9	50.86
CDY24955	Canola	cytosol	43.48	49.67
CDY07644	Canola	cytosol	43.19	49.5
Bra000140.1-P	Field mustard	cytosol	43.19	49.34
PGSC0003DMT400025041	Potato	cytosol	40.0	44.23
Solyc06g005480.2.1	Tomato	cytosol	39.71	43.91
GSMUA_Achr5P07100_001	Banana	cytosol	54.49	36.36
TraesCS3A01G274100.1	Wheat	nucleus	20.87	25.81
TraesCS3A01G409700.1	Wheat	cytosol	17.1	24.38
TraesCS3A01G420900.1	Wheat	cytosol	20.29	24.14
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	21.16	23.17
TraesCS1A01G339700.1	Wheat	cytosol	17.97	21.31
TraesCS5A01G439200.1	Wheat	plastid	22.32	20.53
TraesCS4A01G116900.1	Wheat	plastid	18.84	19.94
TraesCS6A01G283100.1	Wheat	cytosol	17.68	19.61

Protein Annotations

EnsemblPlants:TraesCS3A01G530700.1	EnsemblPlantsGene:TraesCS3A01G530700	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF19	PFAM:PF04720
SEG:seg	TIGRFAMs:TIGR01615	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3A:+:743872706..743874879

Molecular Weight (calculated)

38067.7 Da

IEP (calculated)

8.328

GRAVY (calculated)

-0.348

Length

345 amino acids

Sequence
(BLAST)

001: MMLVAKEFGA LSPPAGAAAA ARRWAPPSTA RVSPRGGSPV GDLWLRTRGG GDGPGGSQHG SHESDMDLAM LVSDFLEGGG GSGGDSRGSS DGEPGGLHDL
101: AHLADKISMY KQAGDEKENE LLSVVHSLLF SIHETELQDF VRGQCTGSCI RHLLVKLLRY SGYDAAVCVS KWQGFDKIPG GDHEYIDVII DNDLPGPERL
201: IIDIDFRSHF EIARAVDPYG TLLDSLPVVY VGTLPRLKQF LNVMVDAAKW SLKQNSMPLP PWRSLSYLQM KWHSKYERKG LQSEQQEFQG ASPSRTLCFG
301: HLKRLKSSLR LELETGRLLM MPVMQAGTKR TAMYERRRRR SLLSF

Best Arabidopsis Sequence Match ( AT2G39650.1 )
(BLAST)

001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N

Arabidopsis Description

At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.