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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G530700.1 Wheat plastid 97.11 97.39
TraesCS3B01G600900.1 Wheat plastid 97.98 97.13
HORVU3Hr1G115940.1 Barley plastid 94.51 77.31
Os01t0973600-01 Rice plastid 71.97 73.89
Zm00001d041955_P001 Maize plastid 70.52 70.93
VIT_13s0019g01100.t01 Wine grape nucleus 43.64 55.51
KRH70457 Soybean cytosol 47.4 53.25
GSMUA_Achr10P... Banana mitochondrion 53.18 52.87
KRH01670 Soybean nucleus 46.53 52.27
AT2G39650.1 Thale cress cytosol 42.77 50.86
CDY24955 Canola cytosol 43.64 50.0
CDY07644 Canola cytosol 43.35 49.83
Bra000140.1-P Field mustard cytosol 43.35 49.67
PGSC0003DMT400025041 Potato cytosol 39.6 43.91
Solyc06g005480.2.1 Tomato cytosol 39.31 43.59
GSMUA_Achr5P07100_001 Banana cytosol 54.05 36.17
TraesCS3D01G273300.1 Wheat nucleus 20.23 25.27
TraesCS3D01G416400.1 Wheat cytosol 20.23 23.97
TraesCS3D01G404300.1 Wheat nucleus 16.76 23.58
TraesCS4D01G277000.1 Wheat peroxisome, plastid 20.52 22.83
TraesCS4D01G188800.1 Wheat mitochondrion 18.79 21.74
TraesCS1D01G341700.1 Wheat cytosol 18.21 21.72
TraesCS5D01G446400.1 Wheat plastid 22.54 20.47
TraesCS6D01G263600.1 Wheat cytosol 17.92 19.38
Protein Annotations
EnsemblPlants:TraesCS3D01G536200.1EnsemblPlantsGene:TraesCS3D01G536200InterPro:PDDEXK-likePANTHER:PTHR31579PANTHER:PTHR31579:SF19PFAM:PF04720
SEG:segTIGRFAMs:TIGR01615MapMan:35.2:::
Description
No Description!
Coordinates
chr3D:+:610072904..610075114
Molecular Weight (calculated)
38278.0 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.370
Length
346 amino acids
Sequence
(BLAST)
001: MMLVAKEFGA LSPPGAVAAQ RRWAPPSTAR VSPRGGSPVG DLWLRTRGGG DGPGGSQHGS HESDMDLAML VSDFLEGGGG GGGGGDSRGS SDGEPGGLHD
101: LAHLADKISM YKQAGDEKEN ELLSVVHSLL FSIHETELQD FVRGQCTGSC IRHLLVKLLR YSGYDTAVCV SKWQGFDKIP GGDHEYIDVI IDNDLTGPER
201: LIIDIDFRSH FEIARAVDPY GTLLDSLPVV YVGTLPRLKQ FLNVMVDAAK WSLKQNSMPL PPWRSLSYLQ MKWHSKYERK GLHSEQQEFQ GASPSRALCF
301: GHLKRLKSSL RLELETRRLL MMPVMQAGTK RTAMYERRRR RSLLSF
Best Arabidopsis Sequence Match ( AT2G39650.1 )
(BLAST)
001: MGMDLRVVPA EEWLNRGIDS SHDGEHDLGL MVTDFLETGG GSGGAGSWCS SDSDSGFPDP SYLSDKIQYL KYSMAQHETE VLSVVRTLML TIKEKDLHSV
101: KSGTCNASCI RFYLAKLLRL SGYDAAVCSA RWQGGGKVPG GDNEYIDIIL SDTEVGQDDR LIVDIDFRSH FEIARAVDSY QRIMESLPVV YVGTVARLNQ
201: FLQVMVDAAK FSLKQNSMPL PPWRSLNYLR SKWHSPHKRH LGPIDQQGPG MFSPGLHGQC AENLKRLQFA LQVEQEAERF MKKKSGFSRR N
Arabidopsis Description
At2g39650 [Source:UniProtKB/TrEMBL;Acc:O48813]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.