Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G255800.1 | |
| TraesCS1B01G266500.1 | |
| TraesCS1D01G255100.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G22970.1 | TraesCS1A01G255800.1 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | TraesCS1B01G266500.1 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | TraesCS1D01G255100.1 | AT4G15560.1 | 24104567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G442200.1 | Wheat | plastid | 96.33 | 97.87 |
| TraesCS5A01G439200.1 | Wheat | plastid | 95.28 | 96.8 |
| HORVU5Hr1G105950.2 | Barley | plastid | 91.86 | 86.0 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 80.05 | 75.31 |
| EER93295 | Sorghum | plastid | 75.85 | 73.54 |
| Zm00001d034444_P002 | Maize | plastid | 74.8 | 70.37 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 49.34 | 52.37 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 48.56 | 50.96 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 49.34 | 49.21 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 48.82 | 45.7 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 36.48 | 44.69 |
| VIT_05s0020g04500.t01 | Wine grape | nucleus | 43.31 | 42.75 |
| PGSC0003DMT400041951 | Potato | cytosol | 40.42 | 41.62 |
| Bra036877.1-P | Field mustard | cytosol, plastid | 38.06 | 40.96 |
| CDY29750 | Canola | nucleus, plastid | 37.8 | 40.68 |
| AT2G38820.2 | Thale cress | cytosol | 33.07 | 40.65 |
| CDY16266 | Canola | nucleus | 38.06 | 40.62 |
| KRH34359 | Soybean | plastid | 41.21 | 40.57 |
| KRG92439 | Soybean | plastid | 41.21 | 39.95 |
| Bra001897.1-P | Field mustard | cytosol | 34.91 | 39.94 |
| CDX92970 | Canola | cytosol | 34.91 | 39.94 |
| AT3G54550.1 | Thale cress | plastid | 30.18 | 39.93 |
| PGSC0003DMT400015576 | Potato | cytosol, plastid | 41.47 | 39.9 |
| KRH69065 | Soybean | cytosol | 38.06 | 39.62 |
| AT4G14620.1 | Thale cress | cytosol | 35.43 | 39.59 |
| KRH71351 | Soybean | cytosol | 37.27 | 39.55 |
| KRH32089 | Soybean | cytosol | 35.17 | 39.53 |
| CDY18366 | Canola | cytosol | 30.97 | 39.33 |
| Solyc09g082980.2.1 | Tomato | nucleus | 40.94 | 39.2 |
| VIT_00s0179g00360.t01 | Wine grape | cytosol | 40.68 | 39.04 |
| Bra017099.1-P | Field mustard | cytosol | 30.71 | 39.0 |
| KRH31637 | Soybean | cytosol | 39.11 | 38.9 |
| KRG95606 | Soybean | cytosol | 36.75 | 38.78 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 39.37 | 38.56 |
| Bra000098.1-P | Field mustard | cytosol | 31.23 | 38.51 |
| CDY07696 | Canola | cytosol | 31.5 | 38.46 |
| CDX93300 | Canola | cytosol | 29.92 | 38.0 |
| CDY14428 | Canola | cytosol | 30.97 | 37.94 |
| CDX94877 | Canola | cytosol | 34.38 | 37.75 |
| Bra033896.1-P | Field mustard | cytosol | 35.96 | 37.33 |
| CDY10330 | Canola | cytosol | 35.7 | 37.16 |
| AT3G22970.1 | Thale cress | plastid | 35.96 | 37.03 |
| CDY10329 | Canola | plastid | 34.12 | 34.39 |
| PGSC0003DMT400049773 | Potato | nucleus | 36.75 | 32.26 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 36.75 | 32.18 |
| TraesCS3D01G416400.1 | Wheat | cytosol | 23.62 | 30.82 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 23.1 | 30.34 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 22.05 | 30.32 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 18.9 | 29.27 |
| TraesCS4D01G188800.1 | Wheat | mitochondrion | 21.78 | 27.76 |
| TraesCS6D01G263600.1 | Wheat | cytosol | 22.57 | 26.88 |
| TraesCS3D01G536200.1 | Wheat | plastid | 20.47 | 22.54 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G446400.1 | EnsemblPlantsGene:TraesCS5D01G446400 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF19 | PFAM:PF04720 |
| SEG:seg | TIGRFAMs:TIGR01615 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:496846494..496847836
Molecular Weight (calculated)
40667.4 Da
IEP (calculated)
9.708
GRAVY (calculated)
-0.410
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFQLKPGHH HGAMDGKPPP PPPTLAPAPT PPAPPRVSRL RRLLVRVSAS ERLAVAGDGK EREKEERPAA GGEAEVGSVG LDRMVLSFME DSAAVERPPR
101: GRCNCFNGSN YEESDDEEGF FLPSGQASAP PPSAAGDTLE ALKGLVQSAS VAERNLLADA SRIAERCGRT CKGKAECRRA VADGLRALGY DAAVCKSRWE
201: KTKSYPAGEH EYIDAVVGDG GRLIVEVHFR SEFEVARSTK AYRAALQALP PLFVGTSDRL GKIVSVVAEA ARQSMKKKGL HFPPWRKPEY MRAKWLSPHV
301: RTGDKSAATP SPAASATATA VSAASFSGEF ELLFGMNRSG VSPTPGEKIT VVVSPWRPTE EAASKKQQPR AKVVTGLAAV L
101: GRCNCFNGSN YEESDDEEGF FLPSGQASAP PPSAAGDTLE ALKGLVQSAS VAERNLLADA SRIAERCGRT CKGKAECRRA VADGLRALGY DAAVCKSRWE
201: KTKSYPAGEH EYIDAVVGDG GRLIVEVHFR SEFEVARSTK AYRAALQALP PLFVGTSDRL GKIVSVVAEA ARQSMKKKGL HFPPWRKPEY MRAKWLSPHV
301: RTGDKSAATP SPAASATATA VSAASFSGEF ELLFGMNRSG VSPTPGEKIT VVVSPWRPTE EAASKKQQPR AKVVTGLAAV L
001: MMKIQPINND LPANRVESST KPVLKSRLKR LLDRPFTRIS NSEKLLISGD GVVAGTEFEP SLAKMVQNYM EENNDKQTKN GRNTHRCNCF NGNNDISDDE
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H
Arabidopsis Description
Uncharacterized protein At4g14620 [Source:UniProtKB/TrEMBL;Acc:Q8L7H9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.