Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G22970.1 | KRH02173 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH11287 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH16140 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH20991 | AT4G15560.1 | 24104567 |
| AT3G22970.1 | KRH50940 | AT4G15560.1 | 24104567 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69065 | Soybean | cytosol | 87.99 | 92.08 |
| KRH34359 | Soybean | plastid | 63.45 | 62.79 |
| KRG92439 | Soybean | plastid | 63.97 | 62.34 |
| VIT_05s0020g04500.t01 | Wine grape | nucleus | 58.49 | 58.03 |
| Bra001897.1-P | Field mustard | cytosol | 50.13 | 57.66 |
| CDX92970 | Canola | cytosol | 50.13 | 57.66 |
| CDX94877 | Canola | cytosol | 51.44 | 56.77 |
| CDY16266 | Canola | nucleus | 52.22 | 56.02 |
| CDY29750 | Canola | nucleus, plastid | 51.7 | 55.93 |
| Bra036877.1-P | Field mustard | cytosol, plastid | 51.44 | 55.65 |
| AT3G22970.1 | Thale cress | plastid | 52.48 | 54.32 |
| Bra033896.1-P | Field mustard | cytosol | 51.44 | 53.68 |
| AT4G14620.1 | Thale cress | cytosol | 47.78 | 53.67 |
| PGSC0003DMT400041951 | Potato | cytosol | 50.91 | 52.7 |
| CDY10330 | Canola | cytosol | 49.87 | 52.19 |
| PGSC0003DMT400015576 | Potato | cytosol, plastid | 52.48 | 50.76 |
| Solyc09g082980.2.1 | Tomato | nucleus | 52.22 | 50.25 |
| Solyc06g053910.2.1 | Tomato | cytosol, plastid | 50.65 | 49.87 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 42.56 | 48.37 |
| KRH71351 | Soybean | cytosol | 45.17 | 48.19 |
| CDY10329 | Canola | plastid | 47.0 | 47.62 |
| KRH32089 | Soybean | cytosol | 41.51 | 46.9 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 43.08 | 46.74 |
| KRG95606 | Soybean | cytosol | 43.86 | 46.54 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 31.33 | 45.45 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 42.56 | 45.4 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 41.25 | 42.93 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 40.47 | 42.7 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 42.04 | 42.15 |
| EER95459 | Sorghum | plastid | 31.33 | 40.13 |
| TraesCS5B01G442200.1 | Wheat | plastid | 39.16 | 40.0 |
| TraesCS5A01G439200.1 | Wheat | plastid | 38.9 | 39.73 |
| Os03t0162500-01 | Rice | plastid | 31.59 | 39.41 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.81 | 39.33 |
| TraesCS5D01G446400.1 | Wheat | plastid | 38.9 | 39.11 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 41.51 | 39.07 |
| EER91615 | Sorghum | mitochondrion | 29.77 | 38.91 |
| Zm00001d027763_P001 | Maize | plastid | 30.03 | 38.33 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 31.07 | 38.26 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 31.07 | 38.26 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 31.33 | 38.1 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 31.07 | 37.78 |
| Os10t0417800-01 | Rice | plastid | 29.5 | 37.54 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 37.08 | 37.08 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 38.9 | 36.79 |
| EER93295 | Sorghum | plastid | 37.34 | 36.39 |
| HORVU5Hr1G105950.2 | Barley | plastid | 38.64 | 36.36 |
| Zm00001d034444_P002 | Maize | plastid | 38.12 | 36.05 |
| Zm00001d007820_P002 | Maize | plastid | 36.81 | 35.16 |
| KRH43403 | Soybean | cytosol | 22.45 | 32.45 |
| KRH37828 | Soybean | cytosol | 12.27 | 31.13 |
| EER98072 | Sorghum | cytosol, plastid | 37.86 | 30.59 |
| KRH59552 | Soybean | cytosol | 21.67 | 30.51 |
| KRH70457 | Soybean | cytosol | 20.37 | 25.32 |
| KRH01670 | Soybean | nucleus | 20.37 | 25.32 |
| KRH21430 | Soybean | mitochondrion, nucleus | 19.84 | 25.17 |
| KRH10888 | Soybean | mitochondrion | 19.58 | 25.0 |
| KRH50053 | Soybean | mitochondrion | 20.63 | 24.53 |
| KRH77753 | Soybean | cytosol | 17.23 | 24.26 |
| KRH51155 | Soybean | cytosol | 18.8 | 24.24 |
| KRH11519 | Soybean | mitochondrion | 19.32 | 23.72 |
| KRH20449 | Soybean | mitochondrion | 19.84 | 23.1 |
| KRH25597 | Soybean | nucleus | 17.23 | 23.0 |
| KRH27801 | Soybean | cytosol | 16.19 | 22.55 |
| KRH07392 | Soybean | nucleus | 17.49 | 22.41 |
| KRH36535 | Soybean | endoplasmic reticulum, golgi | 19.58 | 22.32 |
| KRH46613 | Soybean | mitochondrion, nucleus | 16.45 | 22.11 |
Protein Annotations
| EMBL:ACUP02006073 | EnsemblPlants:KRH31637 | EnsemblPlantsGene:GLYMA_10G002100 | EntrezGene:100778095 | InterPro:PDDEXK-like | PANTHER:PTHR31579 |
| PANTHER:PTHR31579:SF19 | PFAM:PF04720 | ProteinID:KRH31637 | ProteinID:KRH31637.1 | SEG:seg | TIGRFAMs:TIGR01615 |
| UniParc:UPI000233CDEC | UniProt:I1L7D1 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:222794..224840
Molecular Weight (calculated)
41695.4 Da
IEP (calculated)
5.281
GRAVY (calculated)
-0.416
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMKVQPIA IDIDSEMVKD TAAATAAAVV VRNESVLKSR LKRLFVFDRQ LPKNNNRDVA EFEPSSVCLA KMVQNFMEEQ PPAPPKCGRN RCNCFNANSS
101: DEDDFDLFGA APAPESSNAD ATESLKSLIP CASVGERNLL ADVARIVEKN GKSFKRKDDL RKVVAEALSS LGYDSSICKS KWEKTSSCPA GEYEFIDAIV
201: EGERLIVDVD FRSEFEVARS TGTYKAMLQS LPFTYVGKSE RLTEIVAIVS EAAKQSLKKK GMHVPPWRKR DYMLAKWLSP SSIREKEKEN KQPPSSSVQV
301: AAAAAAPETV SDGDAASTTE SDCGELELIF GGEMSPETEY GEAKAESAVA TKPAWQPPAV KPKSVERGTK VVTGLASLLK DKP
101: DEDDFDLFGA APAPESSNAD ATESLKSLIP CASVGERNLL ADVARIVEKN GKSFKRKDDL RKVVAEALSS LGYDSSICKS KWEKTSSCPA GEYEFIDAIV
201: EGERLIVDVD FRSEFEVARS TGTYKAMLQS LPFTYVGKSE RLTEIVAIVS EAAKQSLKKK GMHVPPWRKR DYMLAKWLSP SSIREKEKEN KQPPSSSVQV
301: AAAAAAPETV SDGDAASTTE SDCGELELIF GGEMSPETEY GEAKAESAVA TKPAWQPPAV KPKSVERGTK VVTGLASLLK DKP
001: MPFTMKIQPI DIDSSPTVAR AESGNKPVLK SRLKRLFDRP FTNVLRNSTT TTTEKPFVVT GGEVQCGGVV TEFEPSSVCL AKMVQNFIEE NNEKQAKCGR
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
101: NRCNCFNGNN DGSSDDESDL FGGSIDGCDA SDHLKSLIPC TTVGERNLLA DAAKIVDKNK SVKRKDDMKK IVNEGLLSLN YNSSICKSKW DKSPSFPAGE
201: YEYIDVIIGE ERLIIDVDFR SEFDIARQTS GYKVLLQSLP FIFVGKSDRL SQIVFLISEA AKQSLKKKGM PFPPWRKAEY MRSKWLSSYT RASVVVVDET
301: VTVTDVTAAD AAVEKEVDSV EIELVFEEKC LSPRVIVNSS SSPTDGDDDV AVEREVKAVT GLASLFKEKP
Arabidopsis Description
At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.