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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92439
KRG98682
KRH02173
KRH05426
KRH05459
KRH11287
KRH15534
KRH16140
KRH20991
KRH22690
KRH25207
KRH25208
KRH26622
KRH30442
KRH31637
KRH34359
KRH46251
KRH50940
KRH52197
KRH61504
KRH69065
KRH73804

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15560.1 KRH22690 AT1G08290.1 24104567
AT4G15560.1 KRH25207 AT1G08290.1 24104567
AT4G15560.1 KRH25208 AT1G08290.1 24104567
AT4G15560.1 KRH26622 AT1G08290.1 24104567
AT4G15560.1 KRH30442 AT1G08290.1 24104567
AT4G15560.1 KRH05426 AT2G26080.1 24104567
AT4G15560.1 KRH05459 AT2G26080.1 24104567
AT4G15560.1 KRH15534 AT2G26080.1 24104567
AT4G15560.1 KRH52197 AT2G26080.1 24104567
AT4G15560.1 KRH61504 AT2G26080.1 24104567
AT4G15560.1 KRG92439 AT3G22970.1 24104567
AT4G15560.1 KRH31637 AT3G22970.1 24104567
AT4G15560.1 KRH34359 AT3G22970.1 24104567
AT4G15560.1 KRH69065 AT3G22970.1 24104567
AT4G15560.1 KRH02173 AT4G15560.1 21798944
AT4G15560.1 KRH11287 AT4G15560.1 21798944
AT4G15560.1 KRH16140 AT4G15560.1 21798944
AT4G15560.1 KRH20991 AT4G15560.1 21798944
AT4G15560.1 KRH50940 AT4G15560.1 21798944
AT4G15560.1 KRG98682 AT4G26780.1 24104567
AT4G15560.1 KRH46251 AT4G26780.1 24104567
AT4G15560.1 KRH73804 AT4G26780.1 24104567
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH11287 Soybean peroxisome, plastid 54.2 16.44
Bra001832.1-P Field mustard peroxisome 57.25 12.14
GSMUA_Achr10P... Banana cytosol 57.25 11.81
VIT_05s0020g02130.t01 Wine grape plastid 61.83 11.31
CDX90583 Canola plastid 58.78 11.26
CDY32433 Canola plastid 61.07 11.17
PGSC0003DMT400058821 Potato plastid 61.07 11.13
Solyc01g067890.2.1 Tomato plastid 61.07 11.13
Bra012779.1-P Field mustard plastid 58.02 11.11
CDY48893 Canola plastid 60.31 11.03
CDY64791 Canola plastid 60.31 11.03
Bra033495.1-P Field mustard plastid 59.54 11.02
KRH20991 Soybean plastid 60.31 10.96
AT3G21500.3 Thale cress plastid 56.49 10.93
CDY52177 Canola plastid 61.07 10.91
CDY09752 Canola plastid 59.54 10.86
Os05t0408900-03 Rice plastid 58.78 10.69
KRH02173 Soybean plastid 58.02 10.67
KRH50940 Soybean plastid 59.54 10.64
EES19518 Sorghum mitochondrion, plastid 58.02 10.53
AT4G15560.1 Thale cress plastid 57.25 10.46
Zm00001d038170_P001 Maize plastid 58.78 10.29
GSMUA_Achr3P24940_001 Banana plastid 58.78 10.29
TraesCS1A01G255800.1 Wheat plastid 55.73 10.25
TraesCS1B01G266500.1 Wheat plastid 55.73 10.25
TraesCS1D01G255100.1 Wheat plastid 55.73 10.25
HORVU1Hr1G060610.9 Barley mitochondrion, plastid 55.73 10.06
KRG99484 Soybean plastid 54.2 9.94
KRH39479 Soybean plastid 53.44 9.59
KRH45527 Soybean plastid 51.91 9.52
KRH02914 Soybean plastid 52.67 9.48
KRH45528 Soybean plastid 51.15 9.38
KRH52494 Soybean plastid 40.46 7.4
KRH61817 Soybean plastid 39.69 7.21
KRH18981 Soybean endoplasmic reticulum, extracellular 0.76 5.0
Protein Annotations
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.970MapMan:35.1UniProt:A0A0R0GCP9EMBL:ACUP02008789
InterPro:Dxylulose-5-P_synthaseEnsemblPlantsGene:GLYMA_14G135000GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0008661GO:GO:0009058GO:GO:0009987GO:GO:0016114GO:GO:0016740
EnsemblPlants:KRH16140ProteinID:KRH16140ProteinID:KRH16140.1PFAM:PF02779PANTHER:PTHR43322PANTHER:PTHR43322:SF4
MetaCyc:PWY-6891MetaCyc:PWY-6892MetaCyc:PWY-7560SUPFAM:SSF52518InterPro:THDP-bindingInterPro:Transketolase-like_Pyr-bd
UniParc:UPI0006EDA4A3:::::
Description
hypothetical protein
Coordinates
chr14:+:23581321..23585145
Molecular Weight (calculated)
14137.8 Da
IEP (calculated)
8.851
GRAVY (calculated)
-0.059
Length
131 amino acids
Sequence
(BLAST)
001: MAQARARRRG PASLHSRFSR GVYLWNYFFS SPAYQRGSAI GEKHLLVRFA VDRGGLVGPD GSTHYGAFDV TFTACLPNMV VMVASDDAEI FHTVATAAAI
101: SDQPCCFRYQ KGNGVGVEIP PGNKGIPLEV S
Best Arabidopsis Sequence Match ( AT3G21500.2 )
(BLAST)
001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHGVL KFDPETGKQF KNISKTQSYT SCFVEALIAE AEADKDIVAI HAAMGGGTML NLFESRFPTR
401: CFDVGIAEQH AVTFAAGLAC EGLKPFCTIY SSFMQRAYDQ VVHDVDLQKL PVRFAIDRAG LMGADGPTHC GAFDVTFMAC LPNMIVMAPS DEAELFNMVA
501: TAAAIDDRPS CFRYHRGNGI GVSLPPGNKG VPLQIGRGRI LRDGERVALL GYGSAVQRCL EAASMLSERG LKITVADARF CKPLDVALIR SLAKSHEVLI
601: TVEEGSIGGF GSHVVQFLAL DGLLDGKLKV YRTWITNGST S
Arabidopsis Description
DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.