CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45527	Soybean	plastid	95.38	95.38
KRG99484	Soybean	plastid	92.86	92.86
KRH39479	Soybean	plastid	85.15	83.29
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.94	80.39
VIT_00s0218g00110.t01	Wine grape	plastid	80.25	79.81
Os07t0190000-01	Rice	plasma membrane, plastid	79.13	79.24
Solyc11g010850.1.1	Tomato	plastid	78.99	78.99
GSMUA_Achr5P15060_001	Banana	plastid	76.19	78.73
PGSC0003DMT400041591	Potato	plastid	79.27	78.61
TraesCS2D01G575800.1	Wheat	plastid	78.15	78.26
HORVU1Hr1G084900.9	Barley	plastid	77.59	77.81
TraesCS2A01G565400.1	Wheat	plastid	78.01	77.25
TraesCS1D01G392500.1	Wheat	plastid	77.03	77.14
TraesCS1A01G384300.1	Wheat	plastid	76.89	77.0
GSMUA_Achr5P24730_001	Banana	plastid	76.19	76.94
Zm00001d019060_P001	Maize	plastid	77.59	76.2
EER96005	Sorghum	plastid	77.45	75.75
TraesCS2B01G626400.2	Wheat	plastid	78.15	74.01
HORVU2Hr1G126150.4	Barley	plastid	77.45	72.76
TraesCS1B01G411100.1	Wheat	mitochondrion	77.31	70.86
OQU88632	Sorghum	endoplasmic reticulum, vacuole	63.45	69.91
KRH02914	Soybean	plastid	70.17	68.82
KRH11287	Soybean	peroxisome, plastid	41.46	68.52
KRH02173	Soybean	plastid	68.07	68.26
KRH20991	Soybean	plastid	67.93	67.27
KRH50940	Soybean	plastid	68.07	66.3
KRH18981	Soybean	endoplasmic reticulum, extracellular	1.82	65.0
KRH61817	Soybean	plastid	53.08	52.57
KRH52494	Soybean	plastid	52.66	52.51
KRH16140	Soybean	mitochondrion, plastid	9.38	51.15

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	EntrezGene:100799983	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2
EMBL:ACUP02005243	InterPro:Dxylulose-5-P_synthase	EnsemblPlantsGene:GLYMA_08G277100	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	InterPro:IPR009014	UniProt:K7L9B1	EnsemblPlants:KRH45528	ProteinID:KRH45528	ProteinID:KRH45528.1
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI0002338245	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:37090667..37095048

Molecular Weight (calculated)

76815.5 Da

IEP (calculated)

7.850

GRAVY (calculated)

-0.108

Length

714 amino acids

Sequence
(BLAST)

001: MTFCGGAFVK PNYSVSPCHK HKAPSPYQGG RNKFCVRVSA SGSADEERTI IRKEKVGWKI NYSGEKPATP LLDTVNHPIH MKNLSTQDLE QLAAELRADI
101: VHSVSDTGGH LSSSLGVVEL SVALHHVFNT PEDKIIWDVG HQAYPHKILT GRRSRMHTIR KSSGLAGFPK RDESVHDAFG VGHSSTSISA GLGMAVARDL
201: LGKNNSIISV IGDGALTAGQ AYEAMNNAGF LDSNMIVVLN DNKQVSLPTA TLDGPATPVG ALSSALSKIQ ASSEFRKLRE AAKTITKQIG GQTHQVAAKV
301: DEYARGMISA SGSTLFEELG LYYIGPVDGH NIEDLVTIFE KVKAMPAPGP VLIHVVTEKG KGYPPAEKAA DRMHGVVKFD PKTGQQFKAK TSTLSYTQYF
401: AESLIKEAEN DKKIVAIHAA MGGGTGLNYF HKRFPKRCFD VGIAEQHAVT FAAGLAAEGL KPFCAIYSSF LQRGYDQVVH DVDLQKLPVR FAMDRAGLVG
501: ADGPTHCGAF DIAYMACLPN MVVMAPSDEA ELMHMVATAA AIDDRPSCFR FPRGNGIGAT LPLNNKGTSL EIGKGRILVE GSRVAILGYG SVVQQCRQAS
601: EMLKELGIDV TVADARFCKP LDTGLIRLLA KEHEILITVE EGSIGGFGSH VSQFLSLSGI LDGPLKWRAM MLPDRYIEHG SPQVQIEEAG LSSKQIAATV
701: LSLMERPNEA LLFK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.