Factsheet for Solyc11g010850.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041591	Potato	plastid	95.66	94.86
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.64	81.62
KRH45527	Soybean	plastid	79.69	79.69
KRH45528	Soybean	plastid	78.99	78.99
VIT_00s0218g00110.t01	Wine grape	plastid	79.41	78.97
KRG99484	Soybean	plastid	78.57	78.57
GSMUA_Achr5P24730_001	Banana	plastid	77.59	78.36
GSMUA_Achr5P15060_001	Banana	plastid	75.63	78.15
TraesCS2D01G575800.1	Wheat	plastid	77.73	77.84
Os07t0190000-01	Rice	plasma membrane, plastid	77.17	77.28
TraesCS1D01G392500.1	Wheat	plastid	77.17	77.28
TraesCS2A01G565400.1	Wheat	plastid	77.87	77.12
TraesCS1A01G384300.1	Wheat	plastid	76.89	77.0
HORVU1Hr1G084900.9	Barley	plastid	76.61	76.83
KRH39479	Soybean	plastid	78.29	76.58
Zm00001d019060_P001	Maize	plastid	76.61	75.24
EER96005	Sorghum	plastid	76.19	74.52
TraesCS2B01G626400.2	Wheat	plastid	77.87	73.74
HORVU2Hr1G126150.4	Barley	plastid	76.61	71.97
TraesCS1B01G411100.1	Wheat	mitochondrion	76.75	70.35
OQU88632	Sorghum	endoplasmic reticulum, vacuole	62.75	69.14
Solyc01g067890.2.1	Tomato	plastid	69.05	68.57
Solyc08g066950.2.1	Tomato	plastid	51.4	51.76

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	InterPro:Dxylulose-5-P_synthase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661
GO:GO:0009058	GO:GO:0009987	GO:GO:0016114	GO:GO:0016740	InterPro:IPR009014	UniProt:K4D5P3
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00802	PANTHER:PTHR43322
PANTHER:PTHR43322:SF4	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	EnsemblPlantsGene:Solyc11g010850.1	EnsemblPlants:Solyc11g010850.1.1
InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS	InterPro:Transketolase_C
UniParc:UPI00027697C4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:3870455..3875051

Molecular Weight (calculated)

77089.8 Da

IEP (calculated)

7.096

GRAVY (calculated)

-0.094

Length

714 amino acids

Sequence
(BLAST)

001: MAVSSGTVFR INQHPSSPYM KTPRFYNFTK KKFLVKASVN GSDEINGKIV RKEEKDSLQI DFSGEKPPTP FLDTINYPKH MKNLSKMDLE QLAAELRAEI
101: VYSVAKTGGH LSSSLGVVDL TVALHHVFDT PEDKIIWDVG HQAYAHKILT GRRSKMHTMR KTSGLAPFPK RDESVHDAFG AGHSSTSISA GLGMAVARDL
201: LGNNNHVISV IGDGAMTAGQ AYEAMNNAGF LDSNLIVILN DNKQVSLPTA TLDGPATPVG ALSSALSKLQ ASLKFRQLRE AAKTITKQIG PQAHEVAAKV
301: DEYARGMLSA SGSTLFEELG LYYIGPVDGH NIEDLITILE KVKALPAPGP VLIHIVTEKG KGYLPAEAAD DKMHGVAQFD PKTGKQFKAK SPTLTYTQYF
401: AESLIKEAEN DNKIVAIHAA MGGGTGLNYF QKQFPERCFD VGIAEQHAVT FAAGLATEGL KPFCAIYSSF LQRGYDQVVH DVDLQKLPVR FAMDRAGLVG
501: ADGPTHCGAF DVTYMACLPN MVVMAPSDEA ELMHMVATAA AIDDRPSCFR FPRGNGIGAI LPLNNKGIPI EVGKGRILRE GERVAILGYG SIIQQCLGAA
601: DILNSHDIRV TVADARFCKP LDADLIRSLA KEHEILITVE EGSIGGFGSH VSHFLSLNSI LDGPLKLRSM LLPDRYIDHG SPVDQIEAAG LSSRHISSTV
701: LTLLGRPKEA MVVN

Best Arabidopsis Sequence Match ( AT4G15560.1 )
(BLAST)

001: MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE
101: LRSDVIFNVS KTGGHLGSSL GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE HDCFGTGHSS TTISAGLGMA
201: VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ
301: LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS
401: YTTYFAEALV AEAEVDKDVV AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY DQVVHDVDLQ KLPVRFAMDR
501: AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS
601: CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH
701: IAATALNLIG APREALF

Arabidopsis Description

DXSDXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.