Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G575800.1 | Wheat | plastid | 90.53 | 96.49 |
| TraesCS2A01G565400.1 | Wheat | plastid | 91.18 | 96.12 |
| HORVU1Hr1G084900.9 | Barley | plastid | 85.92 | 91.71 |
| TraesCS2B01G626400.2 | Wheat | plastid | 90.26 | 90.98 |
| Os07t0190000-01 | Rice | plasma membrane, plastid | 81.05 | 86.4 |
| EER96005 | Sorghum | plastid | 81.32 | 84.66 |
| Zm00001d019060_P001 | Maize | plastid | 80.79 | 84.46 |
| GSMUA_Achr4P17600_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 43.42 | 80.88 |
| GSMUA_Achr5P15060_001 | Banana | plastid | 72.63 | 79.88 |
| GSMUA_Achr5P24730_001 | Banana | plastid | 73.29 | 78.78 |
| OQU88632 | Sorghum | endoplasmic reticulum, vacuole | 66.45 | 77.93 |
| KRH45527 | Soybean | plastid | 73.16 | 77.87 |
| KRH45528 | Soybean | plastid | 72.76 | 77.45 |
| KRG99484 | Soybean | plastid | 72.5 | 77.17 |
| VIT_00s0218g00110.t01 | Wine grape | plastid | 72.5 | 76.74 |
| Solyc11g010850.1.1 | Tomato | plastid | 71.97 | 76.61 |
| PGSC0003DMT400041591 | Potato | plastid | 72.24 | 76.25 |
| KRH39479 | Soybean | plastid | 71.58 | 74.52 |
| HORVU1Hr1G060610.9 | Barley | mitochondrion, plastid | 63.82 | 66.8 |
Protein Annotations
| KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | Gene3D:3.40.50.920 | Gene3D:3.40.50.970 | MapMan:9.1.2.2 | UniProt:A0A287JTJ3 |
| InterPro:Dxylulose-5-P_synthase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008661 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016740 | EnsemblPlantsGene:HORVU2Hr1G126150 |
| EnsemblPlants:HORVU2Hr1G126150.4 | InterPro:IPR009014 | HAMAP:MF_00315 | PFAM:PF02779 | PFAM:PF02780 | PFAM:PF13292 |
| ScanProsite:PS00801 | ScanProsite:PS00802 | PANTHER:PTHR43322 | PANTHER:PTHR43322:SF4 | SMART:SM00861 | SUPFAM:SSF52518 |
| SUPFAM:SSF52922 | InterPro:THDP-binding | TIGRFAMs:TIGR00204 | InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_BS |
| InterPro:Transketolase_C | InterPro:Transketolase_N | UniParc:UPI000B4805FD | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:762827285..762830345
Molecular Weight (calculated)
81748.2 Da
IEP (calculated)
7.766
GRAVY (calculated)
-0.112
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: TSDPHLLLPP IACLYRQSFY NYLKQFITSS NKVATARRVH DHGVPPMALQ ASLPSAFHAS PAITHASCRR QLKLRASAAA AASSPSAGDG KVAVTRKDPT
101: TGAWKIEYSS DKPETPLLDT INYPVHMKNL STTDLEQLSA ELRQEIVHTV SKTGGHLSAS LGVVELSVAL HHVFDTPEDK IIWDVGHQSY PHKILTGRRS
201: RMHTIRKTSG LAGFPKRDES AHDAFGVGHS STSISAALGM AVARDLQGKK NHVISVIGDG AMTAGQAYEA MNNSGFLDSN MIVVLNDNKQ VSLPTATLDG
301: PSKPVGALSK ALTKLQSSTK FRRLREAAKT ITKQIGGSTH EVAAKVDEYA RGMISASGST LFEELGLYYI GPVDGHSLED LVTIFEKVKS MPAPGPVLIH
401: IVTEKGKGYP PAEAAADKMH GVVKFDPTTG KQFKTKSPTL SYTQYFAESL IREAEGDDKV VAIHAAMGGG TGLNYFQKRF PERCFDVGIA EQHAVTFAAG
501: LAAEGMKPFC AIYSSFLQRG YDQVVHDVDL QRLPVRFALD RAGLVGADGP THCGAFDVTY MACLPNMVVM APADEAELMH MVATANAIDD RPSCFRFPRG
601: NGVGAVLPLN NRGTPIEVGK GRVLVRGNRV ALVGYGTMVQ ACLKAAEALK EHDLFITVVD ARFCKPLDTE LIRELAAEHE ILITAEEGSI GGFGSHVAHY
701: LSLNGLLDGP LKLRSMFLPD RYIDHGAADD QMEAAGLTPR HIAATVLSLV GRPLEALHLK
101: TGAWKIEYSS DKPETPLLDT INYPVHMKNL STTDLEQLSA ELRQEIVHTV SKTGGHLSAS LGVVELSVAL HHVFDTPEDK IIWDVGHQSY PHKILTGRRS
201: RMHTIRKTSG LAGFPKRDES AHDAFGVGHS STSISAALGM AVARDLQGKK NHVISVIGDG AMTAGQAYEA MNNSGFLDSN MIVVLNDNKQ VSLPTATLDG
301: PSKPVGALSK ALTKLQSSTK FRRLREAAKT ITKQIGGSTH EVAAKVDEYA RGMISASGST LFEELGLYYI GPVDGHSLED LVTIFEKVKS MPAPGPVLIH
401: IVTEKGKGYP PAEAAADKMH GVVKFDPTTG KQFKTKSPTL SYTQYFAESL IREAEGDDKV VAIHAAMGGG TGLNYFQKRF PERCFDVGIA EQHAVTFAAG
501: LAAEGMKPFC AIYSSFLQRG YDQVVHDVDL QRLPVRFALD RAGLVGADGP THCGAFDVTY MACLPNMVVM APADEAELMH MVATANAIDD RPSCFRFPRG
601: NGVGAVLPLN NRGTPIEVGK GRVLVRGNRV ALVGYGTMVQ ACLKAAEALK EHDLFITVVD ARFCKPLDTE LIRELAAEHE ILITAEEGSI GGFGSHVAHY
701: LSLNGLLDGP LKLRSMFLPD RYIDHGAADD QMEAAGLTPR HIAATVLSLV GRPLEALHLK
001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS
Arabidopsis Description
DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.