CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45527	Soybean	plastid	94.12	94.12
KRH45528	Soybean	plastid	92.86	92.86
KRH39479	Soybean	plastid	84.31	82.47
GSMUA_Achr4P17600_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.8	80.15
VIT_00s0218g00110.t01	Wine grape	plastid	79.27	78.83
GSMUA_Achr5P15060_001	Banana	plastid	76.05	78.58
Solyc11g010850.1.1	Tomato	plastid	78.57	78.57
PGSC0003DMT400041591	Potato	plastid	78.85	78.19
TraesCS2D01G575800.1	Wheat	plastid	77.73	77.84
Os07t0190000-01	Rice	plasma membrane, plastid	77.73	77.84
HORVU1Hr1G084900.9	Barley	plastid	77.31	77.53
GSMUA_Achr5P24730_001	Banana	plastid	76.61	77.37
TraesCS1D01G392500.1	Wheat	plastid	76.75	76.86
TraesCS1A01G384300.1	Wheat	plastid	76.75	76.86
TraesCS2A01G565400.1	Wheat	plastid	77.31	76.56
Zm00001d019060_P001	Maize	plastid	76.75	75.38
EER96005	Sorghum	plastid	77.03	75.34
TraesCS2B01G626400.2	Wheat	plastid	77.59	73.47
HORVU2Hr1G126150.4	Barley	plastid	77.17	72.5
TraesCS1B01G411100.1	Wheat	mitochondrion	77.31	70.86
KRH02914	Soybean	plastid	70.87	69.51
OQU88632	Sorghum	endoplasmic reticulum, vacuole	63.03	69.44
KRH11287	Soybean	peroxisome, plastid	40.76	67.36
KRH02173	Soybean	plastid	67.09	67.28
KRH20991	Soybean	plastid	67.65	66.99
KRH50940	Soybean	plastid	67.09	65.35
KRH18981	Soybean	endoplasmic reticulum, extracellular	1.54	55.0
KRH16140	Soybean	mitochondrion, plastid	9.94	54.2
KRH52494	Soybean	plastid	51.54	51.4
KRH61817	Soybean	plastid	51.82	51.32

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	EntrezGene:100814637	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2
EMBL:ACUP02011077	InterPro:Dxylulose-5-P_synthase	EnsemblPlantsGene:GLYMA_18G148700	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	UniProt:I1N1T9	InterPro:IPR009014	EnsemblPlants:KRG99484	ProteinID:KRG99484	ProteinID:KRG99484.1
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43322	PANTHER:PTHR43322:SF4	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861
SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N	UniParc:UPI000233EB3A	:	:

Description

hypothetical protein

Coordinates

chr18:-:25909828..25913754

Molecular Weight (calculated)

77096.9 Da

IEP (calculated)

7.933

GRAVY (calculated)

-0.096

Length

714 amino acids

Sequence
(BLAST)

001: MAFCGGTFVK LNYSVSPCHK YKAPSPYHSY RNKFCVRVSA SGSADEERTI IKKEKDGWKI NYAGEKPATL LLDTINYPIH MKNLSTQDLE QLAAELRADI
101: VHTVSNTGGH LSSSLGVVEL AVALHHVFNT PEDKIIWDVG HQAYPHKILT GRRSRMHTIR KTSGLAGFPK RDESIHDAFG VGHSSTSISA GLGMAVARDL
201: LGKNNSIISV IGDGALTAGQ AYEAMNNAGF LDSNMIVVLN DNKQVSLPTA TLDGPASPVG ALSSALSKIQ ASAEFRKLRE AAKSITKQIG KQTHQVAAKV
301: DEYARGIISG SACTFFEELG LYYIGPVDGH KIEDLVTIFE KVKAMPAPGP VLIHCVTEKG KGYPPAEKAS DKMHGVVKFD PKTGEQFKAK SSTLSYTQYF
401: AESLIKEAEN DKKIVAIHAA MGGGTGLNYF HKRFPERCFD VGIAEQHAVT FAAGLAAEGL KPFCAIYSSF LQRGYDQVVH DVDLQKLPVR FALDRAGLVG
501: ADGPTHCGAF DITYMACLPN MVVMAPSDEA ELMHMVATAA AIDDRPSCFR FPRGNGIGAT LPLNNKGTPL EIGKGRILVE GSRIAILGYG SVVQQCRQAS
601: EMLKELGVDV TVADARFCKP LDTGLIRLLA KEHEILITVE EGSIGGFGSH VSQFLSLSGI LDGPLKWRAM MLPDRYIEHG SPQAQVEDAG LSSKHIAATV
701: LSLMERPKQA LLFK

Best Arabidopsis Sequence Match ( AT3G21500.1 )
(BLAST)

001: MSYQTQINKF SQMALSVFAF PSYINRNPSL KYLKPSSMSS TKYSKVRATT FSEKGEYYSN RPPTPLLDTI NHPMHMKNLS IKELKVLSDE LRSDVIFNVS
101: KTGGHLGSNL GVVELTVALH YIFNTPHDKI LWDVGHQSYP HKILTGRRGK MKTIRQTNGL SGYTKRRESE HDSFGTGHSS TTLSAGLGMA VGRDLKGMNN
201: SVVSVIGDGA MTAGQAYEAM NNAGYLHSNM IVILNDNKQV SLPTANLDGP TQPVGALSCA LSRLQSNCGM IRETSSTLFE ELGFHYVGPV DGHNIDDLVS
301: ILETLKSTKT IGPVLIHVVT EKGRGYPYAE RADDKYHVLK FDPETGKQFK NISKTQSYTS CFVEALIAEA EADKDIVAIH AAMGGGTMLN LFESRFPTRC
401: FDVGIAEQHA VTFAAGLACE GLKPFCTIYS SFMQRAYDQV VHDVDLQKLP VRFAIDRAGL MGADGPTHCG AFDVTFMACL PNMIVMAPSD EAELFNMVAT
501: AAAIDDRPSC FRYHRGNGIG VSLPPGNKGV PLQIGRGRIL RDGERVALLG YGSAVQRCLE AASMLSERGL KITVADARFC KPLDVALIRS LAKSHEVLIT
601: VEEGSIGGFG SHVVQFLALD GLLDGKLKVY RTWITNGSTS

Arabidopsis Description

DXPS11-deoxy-D-xylulose 5-phosphate synthase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTC7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.