CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52494	Soybean	plastid	89.6	90.22
PGSC0003DMT400074817	Potato	cytosol, peroxisome, plastid	20.11	76.32
KRH18981	Soybean	endoplasmic reticulum, extracellular	1.94	70.0
VIT_04s0008g04970.t01	Wine grape	plastid	69.07	69.26
Os06t0142900-02	Rice	peroxisome, plastid	20.8	67.26
Solyc08g066950.2.1	Tomato	plastid	64.22	65.3
AT5G11380.1	Thale cress	plastid	63.38	65.29
Bra008967.1-P	Field mustard	plastid	62.83	65.09
CDX69763	Canola	plastid	62.55	64.8
EER89177	Sorghum	peroxisome	62.55	62.47
Zm00001d045383_P006	Maize	peroxisome	62.69	60.19
KRH02173	Soybean	plastid	55.62	56.32
KRH50940	Soybean	plastid	56.31	55.39
KRH20991	Soybean	plastid	55.34	55.34
KRH45527	Soybean	plastid	53.12	53.64
KRH11287	Soybean	peroxisome, plastid	32.04	53.47
KRH45528	Soybean	plastid	52.57	53.08
KRH39479	Soybean	plastid	53.12	52.47
KRG99484	Soybean	plastid	51.32	51.82
KRH02914	Soybean	plastid	49.1	48.63
KRH16140	Soybean	mitochondrion, plastid	7.21	39.69
GSMUA_Achr4P17610_001	Banana	extracellular, nucleus	0.14	0.05

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	EntrezGene:100787937	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2
EMBL:ACUP02002190	InterPro:Dxylulose-5-P_synthase	EnsemblPlantsGene:GLYMA_04G069600	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987	GO:GO:0016114
GO:GO:0016740	InterPro:IPR009014	UniProt:K7KIL5	EnsemblPlants:KRH61817	ProteinID:KRH61817	ProteinID:KRH61817.1
HAMAP:MF_00315	PFAM:PF02779	PFAM:PF02780	PFAM:PF13292	PANTHER:PTHR43322	PANTHER:PTHR43322:SF3
MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	TIGRFAMs:TIGR00204	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI0002958B49
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:5800218..5806868

Molecular Weight (calculated)

78730.8 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.031

Length

721 amino acids

Sequence
(BLAST)

001: MAATAPSSAY PFGIPFHSHS RRVDCSTSTS MFPIHADLST ISMCPRSASK GLVDQVYAQL DNDDYYREKV PTPILDMVEN PLCLKNLSLQ ELKQLAVEIR
101: SDLSSIMSGT QISPKASMAV VELTVAIHHV FNAPVDKILW DVGDQTYAHK ILTGRRSLMT TMRRKNGLSG VTSRFESEYD AFGAGHGCSS ISAGLEYFIS
201: GMAVARDIKG RRERVIAVIS NWTTMAGQAY EAMSNAGYLD SNMVVILNDS RHSLLPKIEE GPKTFVNALS STLSKLQSSK SFRRFREAAK GVTKRIGRGM
301: HELAAKVDEY ARGMMGPLGS TLFEELGLYY IGPVDGHNIE DLICVLQEVA SLDSMGPVLV HVITDENQGD ENSQKSDISD GQQDEGSVKS DSLDNPVRPQ
401: TYGNCFVETL VVEAEKDKDI VVVHAGLTME PSLELFQEKF PDRFFDVGMA EQHAVTFASG LACGGLKPFC VIASSFLQRA YDQVVHDVDQ QRIPVRFVIT
501: SAGLVGSDGP LQCGAFDINF MSCLPNMIVM APSDEVELMH MVATATRINS QPICFRYPRG ALVGRGYTIS DGIPIKIGRG RVLVEGKDVA FLGYGSMVQN
601: CLKAHSLLAK LGIEVTVADA RFCKPLDIKL LRQLCKHHSF LVTVEEGSIG GFGSQVAQFI AVNGLLDGRI QWRPIVLPDR YIEHASPNEQ LDQAGLSGHH
701: IAATALSLLG RTREALLFMC S

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.