CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008967.1-P	Field mustard	plastid	94.83	94.83
AT5G11380.1	Thale cress	plastid	84.2	83.71
PGSC0003DMT400074817	Potato	cytosol, peroxisome, plastid	20.4	74.74
Os06t0142900-02	Rice	peroxisome, plastid	22.41	69.96
Solyc08g066950.2.1	Tomato	plastid	64.51	63.33
KRH52494	Soybean	plastid	65.09	63.27
VIT_04s0008g04970.t01	Wine grape	plastid	65.09	63.0
KRH61817	Soybean	plastid	64.8	62.55
EER89177	Sorghum	peroxisome	59.63	57.48
Zm00001d045383_P006	Maize	peroxisome	59.63	55.26
CDY32433	Canola	plastid	53.45	51.96
CDY09752	Canola	plastid	53.3	51.67
CDY64791	Canola	plastid	53.02	51.54
CDY48893	Canola	plastid	53.02	51.54
CDX90583	Canola	plastid	50.57	51.46
CDY52177	Canola	plastid	50.43	47.89
GSMUA_Achr4P17610_001	Banana	extracellular, nucleus	0.0	0.0

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	GO:A0A078C3Z1
EnsemblPlants:CDX69763	ProteinID:CDX69763	ProteinID:CDX69763.1	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987
GO:GO:0016114	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00135808001	InterPro:IPR009014	PFAM:PF02779	PFAM:PF02780
PFAM:PF13292	PANTHER:PTHR43322	PANTHER:PTHR43322:SF3	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniPathway:UPA00064	UniParc:UPI0004EE2FB6	:	:	:

Description

BnaA10g21120D

Coordinates

chrLK031790:-:1747443..1750448

Molecular Weight (calculated)

76100.6 Da

IEP (calculated)

7.197

GRAVY (calculated)

-0.019

Length

696 amino acids

Sequence
(BLAST)

001: MGSTSIGYQS GISARFDDRN LNLRSDATFS SLPCKVDFSR KSFFSATTST HNKVCSNRAR VCSLPNTDEK LETPILDSIE TPSQLKNLTV KELKVLADEI
101: RTELLSVLWK TRKSVKPSLA AIELTLALHY VFRAPVDKIL WDAVEQTYAH KVLTRRWSSI PSRQNNGVSS VTSRLENEYD SFGTGHGCNS ISAGLGLAVA
201: RDIKGKRDRV VAVIDSVTIT AGQAYEAMSN AGYLDSNMIV ILNDNRHSLH PNMADGSKAS ISALSSFMSK IQSSQIFRKF RELAKAMTKK IGKGMYEWAA
301: KVDEYARGMV GPTGSTLFEE LGLYYIGPVD GHNIEDLVCV LREVASLDSM GPVLVHVITE ERRDAETANI VVKDRRTYSD CFAEALVKEA EKDRDIVVVH
401: AGIEMDPSLV TFQERFPDRF FNVGMAEQHA VTFSAGLSSG GLKPFCIIPS AFLQRAYDQV VHDVDRQRKA VRFVITSAGL VGSDGPVQCG AFDIAFMSCL
501: PNMIAMAPAN EDELVNMVAT AANVTDRPVC FRFPRGAIVN KNYLVPIGLP IEIGRGRVLL EGQDVALLGY GAMVQNCLNA HSLLSKLGLN VTVADARFCK
601: PLDIKLVRDL CQNHKFLITV EEGCVGGFGS HVAQFIALDG QLDGKIKWRP IVLPDGYIEE ASPNEQLALA GLTGHHIAAT ALSLLGRTRE ALLLMS

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.